Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq422119 114 1e-20
seq19981 114 1e-20
seq1736 107 2e-18
seq279539 100 2e-16
>seq422119
Length=456
Score = 114 bits (126), Expect = 1e-20
Identities = 110/141 (78%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||| ||||| || || ||||||||||| || ||||| |||||||||| ||||| ||
Sbjct 127 GGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTG 186
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| |||||||| ||||| || |||||||||| |||||| || ||||| ||||| ||
Sbjct 187 GTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTCCGTCTG 246
Query 66169 GGACTCAATGATGGCGTGCCA 66189
||||| |||| |||| |||
Sbjct 247 CGACTCGATGACCGCGTACCA 267
>seq19981
Length=13813
Score = 114 bits (126), Expect = 1e-20
Identities = 89/106 (84%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 61271 AGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATG 61330
|||||||||| ||| |||| || || ||||||||||| |||||||| |||||||||||
Sbjct 2893 AGGAGGTGCAGGTGACGGAAGCCCGCTGTTTCTACGGTTTCCAGATCGCCATGGAGAACA 2952
Query 61331 TCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
| ||||| ||||||||||| | || |||||||| ||||||| |||
Sbjct 2953 TACACTCTGAGATGTACAGCCTGCTGATCGATACCTACATCAAGGA 2998
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552
|| |||| || |||| || || || | |||||| || ||||||||||| ||||| |
Sbjct 3633 TGGTGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCT 3692
Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612
|| |||||||||| || || ||||| || ||||||||| ||| ||| | || || |
Sbjct 3693 GGCTGAAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAG 3752
Query 61613 ACGAGG 61618
||||||
Sbjct 3753 ACGAGG 3758
Score = 82.4 bits (90), Expect = 6e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
|||||| || | | || || || | || || || | ||||||||| | ||| | ||
Sbjct 1835 GAACCCTTACTTCGTGACAACCCCAGACGGTTTGTCATCTTCCCCATCCAATATCACGAC 1894
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139
|| |||| |||||||| ||||||||||||||||||||||| | ||| |||||
Sbjct 1895 ATATGGCAAATGTACAAGAAGGCGGAAGCTTCCTTCTGGACCGCGGAAGAGGT 1947
>seq1736
Length=128588
Score = 107 bits (118), Expect = 2e-18
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || ||| |||||||| |||||| | || || || ||||||||||| ||||| |
Sbjct 23196 TGGAGCGATTCAGTCAGGAGGTCCAAGTGACAGAAGCACGGTGTTTCTACGGATTCCAAA 23137
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372
| || ||||||||| ||||||| || |||||||| ||||||| || || |||||||
Sbjct 23136 TCGCGATGGAGAATATCCACTCAGAAATGTACAGCCTTCTCATTGACACCTACATCA 23080
>seq279539
Length=228
Score = 100 bits (110), Expect = 2e-16
Identities = 103/132 (78%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || || || || |||||||||||||||||||| ||||| || || |||||||| |
Sbjct 72 CATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGCTCCTCCTT 131
Query 66400 -GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458
||||| || || || || |||||||| |||||||| ||||| || |||||||
Sbjct 132 CCCCGTG-TTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGCTCCAGGT 190
Query 66459 AGATGGCGAACG 66470
| ||||||||||
Sbjct 191 ACATGGCGAACG 202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395139757526720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |