Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2652 114 5e-20 seq235 113 2e-19 seq5026 100 1e-15 >seq2652 Length=51787 Score = 114 bits (126), Expect = 5e-20 Identities = 139/185 (75%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| | |||| || |||||||||||| ||| || | |||||||| | | |||||| Sbjct 29047 CTCGATGAGCATGCCGATGGTCATGCGCGAGGGGAAGCCGTGCGGGTTGAACAGGATGTC 28988 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCAC--CAGGCCGTTG 449104 ||||||| |||| | || |||||||||||||||||| | | |||| | ||| | Sbjct 28987 GGGCGTCATGCCGCTCTCGGTGAAGGGCATGTCCTCGGCG--GGCCACAGCCGGCTCAGG 28930 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTC-CCCCTGCTCGGGCTTGCGTGTGAA 449163 | ||||||||| ||||| |||||| ||||||||| || || | ||| ||||| | | Sbjct 28929 ATGCCCTTCTGCCCGTGCCGGCTGGCGAACTTGTCGCCGATGGT-GGGGTTGCGCGGCAC 28871 Query 449164 GCGCA 449168 ||||| Sbjct 28870 GCGCA 28866 >seq235 Length=416785 Score = 113 bits (124), Expect = 2e-19 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||||| |||| |||||||| ||||||||||||| || ||||| ||||||| Sbjct 92273 CTCCTTGAGTCGAGGCACACCCAGGGTGACGTTCTTGGCCGACACACCGGCGTAGTGGAA 92214 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | ||||||| ||| ||| ||||| || | | ||||| | |||||| ||||| Sbjct 92213 GGTGTTCAGGGTCATCTGTGTGGCCGGCTCTCCCAGGGACTGGGCGGCGAGGGCTCCTAC 92154 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 92153 CATCTCCCCGGG 92142 >seq5026 Length=28299 Score = 100 bits (110), Expect = 1e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || |||||||||| || ||| | |||||||| | |||| ||| || || || Sbjct 23087 GGCGTTGATGATCTCCTTGATTCGGGGGACCCCCAGGGTGATGTTCATGGAGGCCACTCC 23146 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||| ||||||||||| | |||||||| ||||||| |||||| ||||| | |||| Sbjct 23147 GGCGAAGTGGAAGGTTTTGAGGGTCATCTGCGTGCCGGGCTCCCCGATACTCTGG 23201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2071026687192104