Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq18009 181 2e-43 seq307720 145 1e-32 >seq18009 Length=8709 Score = 181 bits (200), Expect = 2e-43 Identities = 186/235 (79%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 5537 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 5594 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||| |||||| |||| | || Sbjct 5595 CTCGTTCATGGGAAATAATTGCAATCCCCGATCCCTATCACGCGTGGGGTTCAGCGGGTT 5654 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 ||||| ||||||||| |||| | | || || ||| | || ||||||| |||||||||| Sbjct 5655 ACCCGCGCCTGTCGGCGAAGGGTAAACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 5713 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 5714 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 5767 >seq307720 Length=211 Score = 145 bits (160), Expect = 1e-32 Identities = 162/211 (77%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 16 ACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAA 75 || || ||||||||||||| ||||| |||||||||| |||||| ||||||| | | || Sbjct 1 ACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-CCTCGTTCATGGGAAA 58 Query 76 CAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGAT-TACCCGGACCTGTCGG 134 ||||||||| | ||||| |||||| ||| | |||||| |||| ||| Sbjct 59 TAATTGCAATCCCCGATCCCTATCACGCGTGGGGGTCAGCGGGGTACCCGCGCCTGGCGG 118 Query 135 CCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 194 | |||| || | || || ||| | ||||||| |||||||||| |||| | |||||||| Sbjct 119 CGAAGGGGAAACACACGCTGATCCCCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAA 178 Query 195 GGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||||||||| ||||| || Sbjct 179 GGGCATCACAGACCTGTTATTG-CTCAATCT 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749641554100