Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5979 122 7e-23 seq14568 111 1e-19 seq896 98.7 8e-16 seq7729 86.0 5e-12 >seq5979 Length=32993 Score = 122 bits (134), Expect = 7e-23 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| || || ||||||||||| || ||||| |||||||||| ||||| || Sbjct 3633 GGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTG 3574 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || |||||||| ||||| || |||||||||| |||||| || ||||| ||||| || Sbjct 3573 GTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTCCGTCTG 3514 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 ||||| |||| ||||| ||| || | ||||||||| Sbjct 3513 CGACTCGATGACGGCGTACCACAGCTGCTGGGCCTTCACC 3474 Score = 102 bits (112), Expect = 6e-17 Identities = 102/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || || || || |||||||||||||||||||||||||| || || |||||||| | Sbjct 2765 CATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCGCTGCTCCTCCTT 2706 Query 66400 -GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 ||||| || || || || |||||||| |||||||| ||||| || ||||||| Sbjct 2705 CCCCGTG-TTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGCTCCAGGT 2647 Query 66459 AGATGGCGAA 66468 | |||||||| Sbjct 2646 ACATGGCGAA 2637 >seq14568 Length=18141 Score = 111 bits (122), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 61271 AGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATG 61330 |||||||||| ||| |||| || || ||||||||||| |||||||| ||||||||||| Sbjct 7882 AGGAGGTGCAGGTGACGGAAGCCCGCTGTTTCTACGGTTTCCAGATCGCCATGGAGAACA 7823 Query 61331 TCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 | ||||| ||||||||||| | || ||||| || ||||||| ||| Sbjct 7822 TACACTCTGAGATGTACAGCCTGCTGATCGACACCTACATCAAGGA 7777 >seq896 Length=134646 Score = 98.7 bits (108), Expect = 8e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| |||||||| |||||| | || || || ||||||||||| ||||| | Sbjct 21521 TGGAGCGGTTCAGTCAGGAGGTCCAAGTGACAGAAGCACGGTGTTTCTACGGATTCCAAA 21462 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 | || |||||||| ||||||| || |||||||| | ||||| || || ||||||| Sbjct 21461 TCGCGATGGAGAACATCCACTCCGAAATGTACAGCCTGCTCATTGACACCTACATCA 21405 >seq7729 Length=25563 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 || || ||||| || | ||||| || | || ||||| |||||||| |||||||||| Sbjct 14767 CAAGAAGTGCAGGTCCCAGAGGCACGGTCCTTTTACGGGTTCCAGATCCTCATGGAGAAT 14826 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| ||||||||| | | |||||| | || |||||||| || Sbjct 14827 GTCCACTCTGAGATGTACGGCATGCTCATCAACACCTACATCAGAGA 14873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395999363153600