Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq5979 122 7e-23
seq14568 111 1e-19
seq896 98.7 8e-16
seq7729 86.0 5e-12
>seq5979
Length=32993
Score = 122 bits (134), Expect = 7e-23
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||| ||||| || || ||||||||||| || ||||| |||||||||| ||||| ||
Sbjct 3633 GGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTG 3574
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| |||||||| ||||| || |||||||||| |||||| || ||||| ||||| ||
Sbjct 3573 GTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTCCGTCTG 3514
Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
||||| |||| ||||| ||| || | |||||||||
Sbjct 3513 CGACTCGATGACGGCGTACCACAGCTGCTGGGCCTTCACC 3474
Score = 102 bits (112), Expect = 6e-17
Identities = 102/130 (78%), Gaps = 2/130 (2%)
Strand=Plus/Minus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || || || || |||||||||||||||||||||||||| || || |||||||| |
Sbjct 2765 CATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCGCTGCTCCTCCTT 2706
Query 66400 -GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458
||||| || || || || |||||||| |||||||| ||||| || |||||||
Sbjct 2705 CCCCGTG-TTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGCTCCAGGT 2647
Query 66459 AGATGGCGAA 66468
| ||||||||
Sbjct 2646 ACATGGCGAA 2637
>seq14568
Length=18141
Score = 111 bits (122), Expect = 1e-19
Identities = 88/106 (83%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 61271 AGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATG 61330
|||||||||| ||| |||| || || ||||||||||| |||||||| |||||||||||
Sbjct 7882 AGGAGGTGCAGGTGACGGAAGCCCGCTGTTTCTACGGTTTCCAGATCGCCATGGAGAACA 7823
Query 61331 TCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
| ||||| ||||||||||| | || ||||| || ||||||| |||
Sbjct 7822 TACACTCTGAGATGTACAGCCTGCTGATCGACACCTACATCAAGGA 7777
>seq896
Length=134646
Score = 98.7 bits (108), Expect = 8e-16
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || ||| |||||||| |||||| | || || || ||||||||||| ||||| |
Sbjct 21521 TGGAGCGGTTCAGTCAGGAGGTCCAAGTGACAGAAGCACGGTGTTTCTACGGATTCCAAA 21462
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372
| || |||||||| ||||||| || |||||||| | ||||| || || |||||||
Sbjct 21461 TCGCGATGGAGAACATCCACTCCGAAATGTACAGCCTGCTCATTGACACCTACATCA 21405
>seq7729
Length=25563
Score = 86.0 bits (94), Expect = 5e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
|| || ||||| || | ||||| || | || ||||| |||||||| ||||||||||
Sbjct 14767 CAAGAAGTGCAGGTCCCAGAGGCACGGTCCTTTTACGGGTTCCAGATCCTCATGGAGAAT 14826
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|||||||| ||||||||| | | |||||| | || |||||||| ||
Sbjct 14827 GTCCACTCTGAGATGTACGGCATGCTCATCAACACCTACATCAGAGA 14873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395999363153600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |