Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq794 114 5e-20 seq45 104 1e-16 seq551 100 1e-15 >seq794 Length=141998 Score = 114 bits (126), Expect = 5e-20 Identities = 139/185 (75%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| | |||| || |||||||||||| ||| || | |||||||| | | |||||| Sbjct 130210 CTCGATGAGCATGCCGATGGTCATGCGCGAGGGGAAGCCGTGCGGGTTGAACAGGATGTC 130151 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCAC--CAGGCCGTTG 449104 ||||||| |||| | || |||||||||||||||||| | | |||| | ||| | Sbjct 130150 GGGCGTCATGCCGCTCTCGGTGAAGGGCATGTCCTCGGCG--GGCCACAGCCGGCTCAGG 130093 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTC-CCCCTGCTCGGGCTTGCGTGTGAA 449163 | ||||||||| ||||| |||||| ||||||||| || || | ||| ||||| | | Sbjct 130092 ATGCCCTTCTGCCCGTGCCGGCTGGCGAACTTGTCGCCGATGGT-GGGGTTGCGCGGCAC 130034 Query 449164 GCGCA 449168 ||||| Sbjct 130033 GCGCA 130029 >seq45 Length=418265 Score = 104 bits (114), Expect = 1e-16 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||||| |||| |||||||| ||||||||||||| || || || ||||||| Sbjct 175490 CTCCTTGAGTCGAGGCACACCCAGGGTGACGTTCTTGGCCGACACACCAGCGTAGTGGAA 175431 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | ||||||| ||| ||| ||||| || | | ||||| | || ||| ||||| Sbjct 175430 GGTGTTCAGGGTCATCTGTGTGGCCGGCTCTCCCAGGGACTGGGCGGCCAGGGCTCCTAC 175371 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 175370 CATCTCCCCGGG 175359 >seq551 Length=176848 Score = 100 bits (110), Expect = 1e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || |||||||||| || ||| | |||||||| | |||| ||| || || || Sbjct 26929 GGCGTTGATGATCTCCTTGATTCGGGGGACCCCCAGGGTGATGTTCATGGAGGCCACTCC 26988 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||| ||||||||||| | |||||||| ||||||| |||||| ||||| | |||| Sbjct 26989 GGCGAAGTGGAAGGTTTTGAGGGTCATCTGCGTGCCGGGCTCCCCGATACTCTGG 27043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2075880960724520