Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq39321 398 1e-108 seq670 181 2e-43 >seq39321 Length=1922 Score = 398 bits (440), Expect = 1e-108 Identities = 245/256 (96%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 610 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 553 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 552 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 493 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 492 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 434 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 433 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 374 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 373 GCCATAGTCCCTCTAA 358 >seq670 Length=345836 Score = 181 bits (200), Expect = 2e-43 Identities = 186/235 (79%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 335945 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 335888 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||| |||||| |||| | || Sbjct 335887 CTCGTTCATGGGAAATAATTGCAATCCCCGATCCCTATCACGCGTGGGGTTCAGCGGGTT 335828 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 ||||| ||||||||| |||| | | || || ||| | || ||||||| |||||||||| Sbjct 335827 ACCCGCGCCTGTCGGCGAAGGGTAAACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 335769 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 335768 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 335715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751422962435