Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq39321 158 5e-36 seq670 149 3e-33 seq25354 120 1e-24 seq1472 111 7e-22 >seq39321 Length=1922 Score = 158 bits (174), Expect = 5e-36 Identities = 134/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 1663 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 1722 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || |||||||||||| |||| Sbjct 1723 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 1782 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 1783 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 1827 >seq670 Length=345836 Score = 149 bits (164), Expect = 3e-33 Identities = 102/115 (89%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 338535 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 338594 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 338595 GGTCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 338649 Score = 131 bits (144), Expect = 7e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 337664 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 337723 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 337724 ACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 337783 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||||| ||| || || Sbjct 337784 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 337823 >seq25354 Length=8339 Score = 120 bits (132), Expect = 1e-24 Identities = 86/99 (87%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||| |||| |||||||||||||||||||||||||| ||||||||| || Sbjct 578 GAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGCAGCGGTCCT 637 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||| ||||| | ||||||||||||||| Sbjct 638 GACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 676 >seq1472 Length=273364 Score = 111 bits (122), Expect = 7e-22 Identities = 93/113 (82%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||| ||| |||||||| |||| ||| |||| |||||||||||||||| |||||| Sbjct 19336 GGACCCAAAAAATGGTGAAATATGTCTGGGCAGGGCGAAGCCAGAGGAAACT--GGTGGA 19279 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || ||||||||| ||| ||||||||||| | ||| | ||||||||||||| Sbjct 19278 GGTCCGCAGCGGTCCTGACGTGCAAATCGGTTGTCCGACCTGGGTATAGGGGC 19226 Score = 93.3 bits (102), Expect = 2e-16 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 |||| |||| ||| |||| |||||||||||||||| |||||||| ||||||||| | Sbjct 13144 TGAAATATGTCTGGGCAGGGCGAAGCCAGAGGAAACT--GGTGGAGGTCCGCAGCGGTCC 13087 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || ||||||||||| | ||| | ||||||||||||| Sbjct 13086 TGACGTGCAAATCGGTTGTCCGACCTGGGTATAGGGGC 13049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078300966950