Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3116 114 1e-20 seq8880 107 2e-18 seq1886 107 2e-18 seq18090 105 5e-18 seq16166 105 5e-18 seq36092 104 2e-17 seq18171 84.2 2e-11 >seq3116 Length=119845 Score = 114 bits (126), Expect = 1e-20 Identities = 89/106 (84%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 61271 AGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATG 61330 |||||||||| ||| |||| || || |||||||||||||||||||| ||||||||||| Sbjct 106273 AGGAGGTGCAGGTGACGGAAGCCCGCTGTTTCTACGGCTTCCAGATCGCCATGGAGAACA 106214 Query 61331 TCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 | ||||| ||||||||||| | || ||||| || ||||||| ||| Sbjct 106213 TACACTCTGAGATGTACAGCCTGCTGATCGACACCTACATCAAGGA 106168 Score = 114 bits (126), Expect = 1e-20 Identities = 89/106 (84%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 61271 AGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATG 61330 |||||||||| ||| |||| || || ||||||||||| |||||||| ||||||||||| Sbjct 116265 AGGAGGTGCAGGTGACGGAAGCCCGCTGTTTCTACGGTTTCCAGATCGCCATGGAGAACA 116206 Query 61331 TCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 | ||||| ||||||||||| | || |||||||| ||||||| ||| Sbjct 116205 TACACTCTGAGATGTACAGCCTGCTGATCGATACCTACATCAAGGA 116160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552 || |||| || |||| || || || | |||||| || ||||||||||| ||||| | Sbjct 115534 TGGTGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCT 115475 Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612 || |||||||||| || || ||||| || ||||||||| ||| ||| | || || | Sbjct 115474 GGCTGAAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAG 115415 Query 61613 ACGAGG 61618 |||||| Sbjct 115414 ACGAGG 115409 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 |||||| || | | || || || | || || || | ||||||||| | ||| | || Sbjct 107590 GAACCCTTACTTCGTGACAACCCCAGACGGTTTGTCATCTTCCCCATCCAATATCACGAC 107531 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || |||| |||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct 107530 ATATGGCAAATGTACAAGAAGGCGGAAGCTTCCTTCTGGACCGCGGAAGAGGT 107478 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 |||||| || | | || || || | || || || | ||||||||| | ||| | || Sbjct 117320 GAACCCTTACTTCGTGACAACCCCAGACGGTTTGTCATCTTCCCCATCCAATATCACGAC 117261 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || |||| |||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct 117260 ATATGGCAAATGTACAAGAAGGCGGAAGCTTCCTTCTGGACCGCGGAAGAGGT 117208 >seq8880 Length=37550 Score = 107 bits (118), Expect = 2e-18 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| |||||||| |||||| | || || || ||||||||||| ||||| | Sbjct 1672 TGGAGCGATTCAGTCAGGAGGTCCAAGTGACAGAAGCACGGTGTTTCTACGGATTCCAAA 1613 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 | || ||||||||| ||||||| || |||||||| ||||||| || || ||||||| Sbjct 1612 TCGCGATGGAGAATATCCACTCAGAAATGTACAGCCTTCTCATTGACACCTACATCA 1556 >seq1886 Length=180247 Score = 107 bits (118), Expect = 2e-18 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| |||||||| |||||| | || || || ||||||||||| ||||| | Sbjct 88269 TGGAGCGATTCAGTCAGGAGGTCCAAGTGACAGAAGCACGGTGTTTCTACGGATTCCAAA 88210 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 | || ||||||||| ||||||| || |||||||| ||||||| || || ||||||| Sbjct 88209 TCGCGATGGAGAATATCCACTCAGAAATGTACAGCCTTCTCATTGACACCTACATCA 88153 >seq18090 Length=13718 Score = 105 bits (116), Expect = 5e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| || || ||||||||||| || ||||| |||||||||| ||||| || Sbjct 4973 GGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTG 5032 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || |||||||| ||||| || |||||||| | |||||| || ||||| ||||| || Sbjct 5033 GTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCCGTCTCCGTCTG 5092 Query 66169 GGACTCAATGATGGCGTGCCA 66189 || || |||| |||| ||| Sbjct 5093 CGATTCGATGACCGCGTACCA 5113 Score = 100 bits (110), Expect = 2e-16 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || || || || |||||||||||||||||||| ||||| || || |||||||| | Sbjct 5867 CATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGCTCCTCCTT 5926 Query 66400 -GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 ||||| || || || || |||||||| |||||||| ||||| || ||||||| Sbjct 5927 CCCCGTG-TTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGCTCCAGGT 5985 Query 66459 AGATGGCGAACG 66470 | |||||||||| Sbjct 5986 ACATGGCGAACG 5997 >seq16166 Length=16622 Score = 105 bits (116), Expect = 5e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| || || ||||||||||| || ||||| |||||||||| ||||| || Sbjct 21 GGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTG 80 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || |||||||| ||||| || |||||||| | |||||| || ||||| ||||| || Sbjct 81 GTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCCGTCTCCGTCTG 140 Query 66169 GGACTCAATGATGGCGTGCCA 66189 || || |||| |||| ||| Sbjct 141 CGATTCGATGACCGCGTACCA 161 Score = 105 bits (116), Expect = 5e-18 Identities = 104/132 (79%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || || || || |||||||||||||||||||||||||| || || |||||||| | Sbjct 923 CATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCGCTGCTCCTCCTT 982 Query 66400 -GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 ||||| || || || || |||||||| |||||||| ||||| || ||||||| Sbjct 983 CCCCGTG-TTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGCTCCAGGT 1041 Query 66459 AGATGGCGAACG 66470 | |||||||||| Sbjct 1042 ACATGGCGAACG 1053 >seq36092 Length=2431 Score = 104 bits (114), Expect = 2e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| |||||||| |||||| | || || || ||||||||||| ||||| | Sbjct 466 TGGAGCGATTCAGTCAGGAGGTCCAAGTGACAGAAGCACGGTGTTTCTACGGATTCCAAA 525 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 | || ||||||||| ||||||| || |||||||| | ||||| || || ||||||| Sbjct 526 TCGCGATGGAGAATATCCACTCAGAAATGTACAGCCTACTCATTGACACCTACATCA 582 >seq18171 Length=35654 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552 || |||| || |||| || || || | |||||| || ||||||||||| ||||| | Sbjct 27531 TGGTGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCT 27472 Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612 || |||||||||| || || ||||| || ||||||||| ||| ||| | || || | Sbjct 27471 GGCTGAAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAG 27412 Query 61613 ACGAGG 61618 |||||| Sbjct 27411 ACGAGG 27406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397184203879760