Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq101354 98.7 1e-18 >seq101354 Length=1212 Score = 98.7 bits (108), Expect = 1e-18 Identities = 139/189 (74%), Gaps = 5/189 (3%) Strand=Plus/Plus Query 47 TTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGA 106 ||||| |||||| ||||||| | || ||||||||| | ||||| ||||||| Sbjct 79 TTACTGGGAATT-CCTCGTTCAGTGGAAATAATTGCAATTCCCAATCCCTATCACGAGTG 137 Query 107 AATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAG 164 |||| | |||||| ||| ||| |||| | | || || ||| | || ||| Sbjct 138 GGGTTCAGCGGGTTACCCACGCCTCTCGATGAAGGGTAGACACACGCTGA-TCCACTCAA 196 Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 224 ||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||||| | Sbjct 197 TGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATC 255 Query 225 TTCCGTGGC 233 | ||||| Sbjct 256 TCGTGTGGC 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750481033790