Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq101354 199 6e-49 seq78554 95.1 2e-17 >seq101354 Length=1212 Score = 199 bits (220), Expect = 6e-49 Identities = 196/248 (79%), Gaps = 9/248 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 193 TCAATGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 251 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA---- 131 || || | |||||| | ||| | |||||||||||||| | | || |||||| Sbjct 252 AATCT-CGTGTGGCTGAACGCCGCTTGTCCCTCTAAGAAGTTGGACGCCGACCATACAGG 310 Query 132 GTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | || || ||| |||||| | ||||| |||||||||||||||| ||||||||| Sbjct 311 GCCGCATAA--CTAGTTAGCATGCCGGAGTCTCATTCGTTATCGGAATTACCCAGACAAA 368 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 || ||||||||||||| |||||||||||||||||| || | ||| | || ||||||| Sbjct 369 TCGCTCCACCAACTAATAACGGCCATGCACCACCAAGCACAAAATTGCGGAACAGCTATC 428 Query 251 AATCTGTC 258 |||||||| Sbjct 429 AATCTGTC 436 >seq78554 Length=2491 Score = 95.1 bits (104), Expect = 2e-17 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 167 CGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAC 226 ||||||| |||||||| || |||| ||| | ||| |||| | |||||||||||||||| Sbjct 2201 CGTTATCTAAATTAACCCGAAAAATTGCTCAATCAATTAAGCATGGCCATGCACCACCAC 2260 Query 227 CCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||| ||||| ||||||||||||| ||| ||| Sbjct 2261 CCACAGAATTGAGAAAGAGCTATCGATCCGTC 2292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795190542186