Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq102735 132 8e-29 seq46103 132 8e-29 seq136888 80.6 5e-13 >seq102735 Length=3752 Score = 132 bits (146), Expect = 8e-29 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 |||| | ||||||||||| || ||||||||| || ||| ||| |||| |||||| | Sbjct 691 GCTTGCTGAATTCTGCTTTACAATTATAGGAAGACACGGCATTGAAAGATCCAAAAGCGA 750 Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||| ||| |||| |||||||||||||||||||||| | ||||||||||||||| ||| Sbjct 751 CGTCCCTAGGAACCTGTGGCTGCCACAAGCCAGTTATCTCCGTGGTAACTTTTCTGACAC 810 Query 232 CTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291 ||| || | ||| | | | | ||||| | ||| ||||||||||| ||||| Sbjct 811 CTCCTGCTTAAAACCCAAAAAGTCAGAGGGATCATGAAGCCCCACTTTCATGGGCTGTAT 870 Query 292 TCA 294 ||| Sbjct 871 TCA 873 >seq46103 Length=3495 Score = 132 bits (146), Expect = 8e-29 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 |||| | ||||||||||| || ||||||||| || ||| ||| |||| |||||| | Sbjct 3202 GCTTGCTGAATTCTGCTTTACAATTATAGGAAGACACGGCATTGAAAGATCCAAAAGCGA 3143 Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||| ||| |||| |||||||||||||||||||||| | ||||||||||||||| ||| Sbjct 3142 CGTCCCTAGGAACCTGTGGCTGCCACAAGCCAGTTATCTCCGTGGTAACTTTTCTGACAC 3083 Query 232 CTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291 ||| || | ||| | | | | ||||| | ||| ||||||||||| ||||| Sbjct 3082 CTCCTGCTTAAAACCCAAAAAGTCAGAGGGATCATGAAGCCCCACTTTCATGGGCTGTAT 3023 Query 292 TCA 294 ||| Sbjct 3022 TCA 3020 >seq136888 Length=9482 Score = 80.6 bits (88), Expect = 5e-13 Identities = 84/109 (77%), Gaps = 5/109 (5%) Strand=Plus/Minus Query 44 AAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAAC 103 ||| || | | ||||||||| ||| ||| |||||||||| ||| || |||||||| | Sbjct 6847 AAACCTCATCAGTCTCATGATGGTTTAATCCCAGCTCACTTTCTCT----GTGGGTGACC 6792 Query 104 AATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||| ||||||| |||||||||||| ||||| |||| |||| ||| Sbjct 6791 AATGAAACGCTTGGTGAATTCTGCTTCACAATGAT-GGAAAAGCCAACA 6744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852618524736