Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq101354 118 2e-24 >seq101354 Length=1212 Score = 118 bits (130), Expect = 2e-24 Identities = 157/214 (73%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||| | |||| || | ||||| |||||||||||||||| Sbjct 290 CTTCTTAGAGGGACAAGCGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 233 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||| ||| | || || || | Sbjct 232 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACATTGAGTGGATCAGCGTGTGTCTAC 173 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| || ||| ||||||| | | || | | ||||| | ||||| | | |||| Sbjct 172 CCTTCATCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGAATTG 113 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 |||||||| | | |||||||||| || ||||| Sbjct 112 CAATTATTTCCACTGAACGAGGAATTCCCAGTAA 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945225031168