Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplopoma_20fimbria_20[genbank_20GCA_5F000499045.1_202013-11-25] 208,506 sequences; 699,326,415 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq206233 178 1e-39 seq155386 178 1e-39 seq58798 178 1e-39 seq172677 122 7e-23 seq133256 122 7e-23 seq195903 89.7 4e-13 >seq206233 Length=6715 Score = 178 bits (196), Expect = 1e-39 Identities = 383/566 (68%), Gaps = 10/566 (2%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || || |||||||| |||| |||||| | || || || || ||||| ||||| Sbjct 4819 GAGGCCAGATTGCAGACCGCTACCTCGTCGTGGCTCGTGTATTCAACGATTTCTGTGCAG 4878 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 || || ||| | ||| ||||| ||||| || || ||||| | ||||| || || Sbjct 4879 AGGTTGCTGGACTTGATGCAGCCCAGGTTCTGGTGGTTGCTCTTCCTGTTGCAGGCGTCT 4938 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||||| ||||||||| || || | || |||||||| || ||||||||||| || Sbjct 4939 TTGTACAGCATGTACGGCGTACCAGATTCTGTCTGGGACTCGATAATGGCGTGCCACAGC 4998 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGT--AGAGGT 66251 | ||||||||| ||| || | || | | ||| || | || |||| | Sbjct 4999 TGCTGAGCCTTCACCACGCGTTTGACCTTCCCCT--CCTTCTCAAAGGAGGTGTAGAGCT 5056 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311 || || || ||||| ||| ||| | || |||| | ||||||||||| | Sbjct 5057 TCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGCTGGGACACATCAGGG 5116 Query 66312 ACCAATCACCATCCTGTTCTACACGA--CGCATAAATAGATCAGGTATCCAGAGGGCGTA 66369 |||| || | || ||| ||| | ||| || || || || ||||| ||||| || Sbjct 5117 ACCAGTCTTGGT--TGCTCTCCACCCTCCTCATGAACAGGTCGGGGATCCACAGGGCATA 5174 Query 66370 GAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACT 66428 ||| || || | |||| |||||||| | || ||| || || || || ||||| | Sbjct 5175 GAAAAGGTCTCTGGCTCTCTGCTCCTCCTTCCCAGTG-TTCTTCTTCAGCTCCAGGAAGT 5233 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 |||| | || ||||| || |||||||| |||||||| | || | ||| | Sbjct 5234 CAAACACATCAAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTCC 5293 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 | || |||||||| || || || |||||| |||| | || ||| || |||||||||| Sbjct 5294 CGCCCTGGTCGACATAACGGGCCGTGTTGTTGTAGACTCTCAGCATGGGCACGAGCCCGT 5353 Query 66549 TAGATTTGCCATTGGTGCCGTCGATG 66574 | || ||||| ||||||||| ||||| Sbjct 5354 TGGAGTTGCCGTTGGTGCCGGCGATG 5379 >seq155386 Length=3452 Score = 178 bits (196), Expect = 1e-39 Identities = 383/566 (68%), Gaps = 10/566 (2%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || || |||||||| |||| |||||| | || || || || ||||| ||||| Sbjct 1399 GAGGCCAGATTGCAGACCGCTACCTCGTCGTGGCTCGTGTATTCAACGATTTCTGTGCAG 1458 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 || || ||| | ||| ||||| ||||| || || ||||| | ||||| || || Sbjct 1459 AGGTTGCTGGACTTGATGCAGCCCAGGTTCTGGTGGTTGCTCTTCCTGTTGCAGGCGTCT 1518 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||||| ||||||||| || || | || |||||||| || ||||||||||| || Sbjct 1519 TTGTACAGCATGTACGGCGTACCAGATTCTGTCTGGGACTCGATAATGGCGTGCCACAGC 1578 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGT--AGAGGT 66251 | ||||||||| ||| || | || | | ||| || | || |||| | Sbjct 1579 TGCTGAGCCTTCACCACGCGTTTGACCTTCCCCT--CCTTCTCAAAGGAGGTGTAGAGCT 1636 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311 || || || ||||| ||| ||| | || |||| | ||||||||||| | Sbjct 1637 TCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGCTGGGACACATCAGGG 1696 Query 66312 ACCAATCACCATCCTGTTCTACACGA--CGCATAAATAGATCAGGTATCCAGAGGGCGTA 66369 |||| || | || ||| ||| | ||| || || || || ||||| ||||| || Sbjct 1697 ACCAGTCTTGGT--TGCTCTCCACCCTCCTCATGAACAGGTCGGGGATCCACAGGGCATA 1754 Query 66370 GAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACT 66428 ||| || || | |||| |||||||| | || ||| || || || || ||||| | Sbjct 1755 GAAAAGGTCTCTGGCTCTCTGCTCCTCCTTCCCAGTG-TTCTTCTTCAGCTCCAGGAAGT 1813 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 |||| | || ||||| || |||||||| |||||||| | || | ||| | Sbjct 1814 CAAACACATCAAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTCC 1873 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 | || |||||||| || || || |||||| |||| | || ||| || |||||||||| Sbjct 1874 CGCCCTGGTCGACATAACGGGCCGTGTTGTTGTAGACTCTCAGCATGGGCACGAGCCCGT 1933 Query 66549 TAGATTTGCCATTGGTGCCGTCGATG 66574 | || ||||| ||||||||| ||||| Sbjct 1934 TGGAGTTGCCGTTGGTGCCGGCGATG 1959 >seq58798 Length=3922 Score = 178 bits (196), Expect = 1e-39 Identities = 383/566 (68%), Gaps = 10/566 (2%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || || |||||||| |||| |||||| | || || || || ||||| ||||| Sbjct 2026 GAGGCCAGATTGCAGACCGCTACCTCGTCGTGGCTCGTGTATTCAACGATTTCTGTGCAG 2085 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 || || ||| | ||| ||||| ||||| || || ||||| | ||||| || || Sbjct 2086 AGGTTGCTGGACTTGATGCAGCCCAGGTTCTGGTGGTTGCTCTTCCTGTTGCAGGCGTCT 2145 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||||| ||||||||| || || | || |||||||| || ||||||||||| || Sbjct 2146 TTGTACAGCATGTACGGCGTACCAGATTCTGTCTGGGACTCGATAATGGCGTGCCACAGC 2205 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGT--AGAGGT 66251 | ||||||||| ||| || | || | | ||| || | || |||| | Sbjct 2206 TGCTGAGCCTTCACCACGCGTTTGACCTTCCCCT--CCTTCTCAAAGGAGGTGTAGAGCT 2263 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311 || || || ||||| ||| ||| | || |||| | ||||||||||| | Sbjct 2264 TCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGCTGGGACACATCAGGG 2323 Query 66312 ACCAATCACCATCCTGTTCTACACGA--CGCATAAATAGATCAGGTATCCAGAGGGCGTA 66369 |||| || | || ||| ||| | ||| || || || || ||||| ||||| || Sbjct 2324 ACCAGTCTTGGT--TGCTCTCCACCCTCCTCATGAACAGGTCGGGGATCCACAGGGCATA 2381 Query 66370 GAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACT 66428 ||| || || | |||| |||||||| | || ||| || || || || ||||| | Sbjct 2382 GAAAAGGTCTCTGGCTCTCTGCTCCTCCTTCCCAGTG-TTCTTCTTCAGCTCCAGGAAGT 2440 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 |||| | || ||||| || |||||||| |||||||| | || | ||| | Sbjct 2441 CAAACACATCAAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTCC 2500 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 | || |||||||| || || || |||||| |||| | || ||| || |||||||||| Sbjct 2501 CGCCCTGGTCGACATAACGGGCCGTGTTGTTGTAGACTCTCAGCATGGGCACGAGCCCGT 2560 Query 66549 TAGATTTGCCATTGGTGCCGTCGATG 66574 | || ||||| ||||||||| ||||| Sbjct 2561 TGGAGTTGCCGTTGGTGCCGGCGATG 2586 >seq172677 Length=14965 Score = 122 bits (134), Expect = 7e-23 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||| ||||| || ||||||||||| ||| | ||||||||||| |||||| || Sbjct 3041 GTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTTATGGTGCCCAGATTCTGCTGG 2982 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| | ||||| || |||||||| | |||||| || || ||||| || || Sbjct 2981 TTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTACCGGTTTCTGTCTGA 2922 Query 66170 GACTCAATGATGGCGTGCCA 66189 |||||||||||||||||||| Sbjct 2921 GACTCAATGATGGCGTGCCA 2902 >seq133256 Length=12775 Score = 122 bits (134), Expect = 7e-23 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||| ||||| || ||||||||||| ||| | ||||||||||| |||||| || Sbjct 9829 GTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTTATGGTGCCCAGATTCTGCTGG 9770 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| | ||||| || |||||||| | |||||| || || ||||| || || Sbjct 9769 TTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTACCGGTTTCTGTCTGA 9710 Query 66170 GACTCAATGATGGCGTGCCA 66189 |||||||||||||||||||| Sbjct 9709 GACTCAATGATGGCGTGCCA 9690 >seq195903 Length=4854 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| ||| | || ||||| | |||||| |||||||||| ||| |||| | Sbjct 375 CAGGAGGTGCAGGTGCCTGAAGCGCGCTCGTTCTACAGCTTCCAGATCCTCATAGAGACT 434 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 | || || ||||||||||| | |||||| | || ||||||||||| Sbjct 435 ATTCATTCAGAGATGTACAGCCTGCTCATCAACACTTACATCAGGGA 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396557713367840