Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10545 143 4e-32 >seq10545 Length=3289957 Score = 143 bits (158), Expect = 4e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 165 TTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 224 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2547381 TTTGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 2547322 Query 225 ACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||| |||||| |||||||| |||| |||||| Sbjct 2547321 ACCCACAGAATCGAGAAAGAGNCATCAGTCTGTC 2547288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796717136535