Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq47 80.6 3e-13 >seq47 Length=1124455 Score = 80.6 bits (88), Expect = 3e-13 Identities = 145/203 (71%), Gaps = 17/203 (8%) Strand=Plus/Plus Query 9 GAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 |||||| ||||||||| || | ||||||||| |||||||| ||| | | |||| ||| Sbjct 226388 GAAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTCAGGCATTCAGGC 226446 Query 69 GTAA-----GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCT-- 120 | ||| |||||||||||||| ||||| |||| ||||| | ||| | ||| Sbjct 226447 GAGTTTGGTGCCCGCTTTGAACACTCTGATTTTTTCAAAGTAAACGCTCCGGACCCCTGA 226506 Query 121 ---CCGCACA-CCAATGAA-GGCATAC-GGGCTCACCAAGAGGTAGGG-CTGGGTAATGC 173 ||| ||| |||| || ||||| | ||| | || |||| |||| ||||| | || Sbjct 226507 GGACCGGACACCCAACCAAGGGCATCCGGGGGGCNCCGGGAGGCAGGGTCTGGGACAGGC 226566 Query 174 AGTA-CTCGCCGTGAGGCGGACC 195 ||| |||||| | |||||||| Sbjct 226567 GGTAGCTCGCCTCGCGGCGGACC 226589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595138101990