Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_029594.1 Length=4301 Score E Sequences producing significant alignments: (Bits) Value seq1513 77.0 9e-11 >seq1513 Length=22358 Score = 77.0 bits (84), Expect = 9e-11 Identities = 91/121 (75%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 758 TGGTGGGATGGTTAT-TGTGGTAACAATGGTGTTATTATTGATGATTTTTATGGATGGTT 816 ||||||||||| ||| || || | || ||||||| | ||||||||||| || ||| | Sbjct 8345 TGGTGGGATGGGTATGTGGGGCAGAGAT-ATGTTATTTTGGATGATTTTTACGGGTGGGT 8403 Query 817 GAAATTTGACGAACTTTTGAAAATTTCAGATAGATATCCTTATAGGGTTCCCATTAAAGG 876 | ||| ||| ||| | |||| ||||| ||| | ||||||| ||||| || |||| || Sbjct 8404 GCAATATGATGAAATGTTGAGAATTTGTGATCGTTATCCTTTGAGGGTACCTGTTAAGGG 8463 Query 877 C 877 | Sbjct 8464 C 8464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13649597157150