Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1234 122 4e-26 seq136 80.6 1e-13 >seq1234 Length=92438 Score = 122 bits (134), Expect = 4e-26 Identities = 88/102 (86%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 51459 GGAAAAGAAACTAACAAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 51400 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | ||||||||| || | | || |||| |||||||||| || Sbjct 51399 CTGAATCCCCGTCCATCTGGCGGACGCGAGACATGTGGCATA 51358 >seq136 Length=1323392 Score = 80.6 bits (88), Expect = 1e-13 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 || |||||||||||||||| |||| |||||| ||||||| ||| ||| |||| ||||| | Sbjct 33496 GGCAAAGAAACTAACCAGGKTTCCTTCAGTAGCGGCGAGCGAAGAGGAAAGAACCCAGTG 33555 Query 61 CCGAATCCCCGCCCCGC 77 || |||||| | || || Sbjct 33556 CCAAATCCCTGGCCAGC 33572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230335664400