Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq6658 167 4e-39
seq11159 123 5e-26
>seq6658
Length=7564740
Score = 167 bits (184), Expect = 4e-39
Identities = 210/282 (74%), Gaps = 10/282 (4%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || | | | | | ||||||||||||||||||||||||
Sbjct 7562050 ATGCTCTTAGCTGAGTGTCCCGCGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 7562109
Query 98 TCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155
|||||||||||| | || |||||| ||| |||||||| ||||||||| | ||||
Sbjct 7562110 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 7562168
Query 156 TCTATTTTGTTGGTTT----CTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGT 210
|||||||||| ||||| || || | | | |||||||| ||||| | ||||||
Sbjct 7562169 TCTATTTTGTGGGTTTTCTTCTCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGGC 7562228
Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270
| ||||| | |||||||||||||||||| ||||| || | |||||
Sbjct 7562229 ATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAAGCGAA 7562288
Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||| || ||||| |||||||||||||||| ||||||||||
Sbjct 7562289 AGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 7562329
>seq11159
Length=3978678
Score = 123 bits (136), Expect = 5e-26
Identities = 200/282 (71%), Gaps = 12/282 (4%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || | | | | | |||||||||||||||||| |||||
Sbjct 3901820 ATGCTCTTAGCTGAGTGTCCCGCGGGGTCCGAAGCGTTTACTTTGAAAAAATTACAGTGT 3901879
Query 98 TCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155
||||||||||||| | || |||||| | | |||||||| ||||||||| | |||
Sbjct 3901880 TCAAAGCAGGCCTGGTCGCCTGAATACCGCAACTAGGAATAATGGAATAGGAC-TCTGGT 3901938
Query 156 TCTATTTTGTTGGTTT------CTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209
||||||||| |||| ||| || | | ||||||| ||||| |||| |
Sbjct 3901939 CCTATTTTGTGAGTTTTCTTCTCTAA-ACTGGGGCCATGATTATGAGGGACGACCGGGTG 3901997
Query 210 TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGA 269
| |||| || |||||||||||||||||| | ||||| | | ||||
Sbjct 3901998 CATTCATATTGTGCTGCTAGAGGTGAAATTCTTGGACTGGCGCAAGACGGATGAAAGCGA 3902057
Query 270 AAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
|||| || ||| | |||||||||||||||| ||| |||||
Sbjct 3902058 AAGCATTTGCCACGAATGTTTTCATTAATCA-AGAATGAAAG 3902098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915047893760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |