Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4807 154 6e-35 seq8287 122 4e-25 seq9138 89.7 2e-15 seq11493 75.2 5e-11 >seq4807 Length=20766 Score = 154 bits (170), Expect = 6e-35 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 8723 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 8664 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 8663 GGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 8609 Score = 131 bits (144), Expect = 7e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 9510 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 9451 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 9450 ACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 9391 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || |||||||| ||| | ||| || || Sbjct 9390 AGAGAGTTCAAGAGGACGTGAAACCGTTAAGAGGTAAACG 9351 >seq8287 Length=1048751 Score = 122 bits (134), Expect = 4e-25 Identities = 98/116 (84%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 569 GGACCCGAAAGA-TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 ||||||||| | |||||||||||||||| ||||| |||| |||| ||||||||||||| Sbjct 581586 GGACCCGAATGTGTGGTGAACTATGCCTGGGTAGGGAGAAGTCAGAAGAAACTCTGGTGG 581527 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||||||| ||| | ||||||||| ||||| || ||||||| || |||| Sbjct 581526 AGGCCCGCAGCGGTCCTGACATGCAAATCGGTCGTCCAACCTGGGTAT-GGTGCGA 581472 >seq9138 Length=5285520 Score = 89.7 bits (98), Expect = 2e-15 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 78 TAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCG 137 |||| ||| ||||| | |||||| ||| ||||||||||| ||||||| || | | Sbjct 3720400 TAAACTTCATCTAAGGTTAAATACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGG 3720459 Query 138 AAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||| ||||||| ||||| | | |||||| || || |||||||| |||||| ||| || Sbjct 3720460 AAAGTTGAAAAGAGCTTTGAAGACAGAGTTCAAGAGGACGTGAAACTGTTGAGAGGCAA 3720518 >seq11493 Length=3875266 Score = 75.2 bits (82), Expect = 5e-11 Identities = 77/101 (76%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 || || ||| | | ||||| |||||||| ||| ||||||||||| ||||||| || Sbjct 1561969 GGTGGAAAACTCCATCTAAGGCTAAATACTGGTATGAGACCGATAGTCGACAAGTACCGT 1561910 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAG 173 | ||||| ||||||| || ||| | ||||||||||| || Sbjct 1561909 AAGGGAAAGTTGAAAAGAACGTTGAAGAGAGAGTTAAAGAG 1561869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079643501000