Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq4807 154 6e-35
seq8287 122 4e-25
seq9138 89.7 2e-15
seq11493 75.2 5e-11
>seq4807
Length=20766
Score = 154 bits (170), Expect = 6e-35
Identities = 103/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 8723 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 8664
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 8663 GGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 8609
Score = 131 bits (144), Expect = 7e-28
Identities = 125/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 9510 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 9451
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 9450 ACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 9391
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || |||||||| ||| | ||| || ||
Sbjct 9390 AGAGAGTTCAAGAGGACGTGAAACCGTTAAGAGGTAAACG 9351
>seq8287
Length=1048751
Score = 122 bits (134), Expect = 4e-25
Identities = 98/116 (84%), Gaps = 2/116 (2%)
Strand=Plus/Minus
Query 569 GGACCCGAAAGA-TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627
||||||||| | |||||||||||||||| ||||| |||| |||| |||||||||||||
Sbjct 581586 GGACCCGAATGTGTGGTGAACTATGCCTGGGTAGGGAGAAGTCAGAAGAAACTCTGGTGG 581527
Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| ||||||||| ||| | ||||||||| ||||| || ||||||| || ||||
Sbjct 581526 AGGCCCGCAGCGGTCCTGACATGCAAATCGGTCGTCCAACCTGGGTAT-GGTGCGA 581472
>seq9138
Length=5285520
Score = 89.7 bits (98), Expect = 2e-15
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 78 TAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCG 137
|||| ||| ||||| | |||||| ||| ||||||||||| ||||||| || | |
Sbjct 3720400 TAAACTTCATCTAAGGTTAAATACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGG 3720459
Query 138 AAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
|||| ||||||| ||||| | | |||||| || || |||||||| |||||| ||| ||
Sbjct 3720460 AAAGTTGAAAAGAGCTTTGAAGACAGAGTTCAAGAGGACGTGAAACTGTTGAGAGGCAA 3720518
>seq11493
Length=3875266
Score = 75.2 bits (82), Expect = 5e-11
Identities = 77/101 (76%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
|| || ||| | | ||||| |||||||| ||| ||||||||||| ||||||| ||
Sbjct 1561969 GGTGGAAAACTCCATCTAAGGCTAAATACTGGTATGAGACCGATAGTCGACAAGTACCGT 1561910
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAG 173
| ||||| ||||||| || ||| | ||||||||||| ||
Sbjct 1561909 AAGGGAAAGTTGAAAAGAACGTTGAAGAGAGAGTTAAAGAG 1561869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079643501000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |