Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq10751 181 2e-43
seq12279 167 4e-39
seq9607 129 9e-28
seq7103 109 9e-22
seq10179 102 1e-19
seq9249 75.2 2e-11
seq5659 73.4 6e-11
>seq10751
Length=374895
Score = 181 bits (200), Expect = 2e-43
Identities = 192/247 (78%), Gaps = 17/247 (7%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| ||
Sbjct 370021 TCATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 370079
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC-CATA 131
|| || | |||||| | |||| | |||||||||||||| ||||| | | ||
Sbjct 370080 AATCT-CGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAGATGAAAGCCAACCGCACAGG 370138
Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191
| || | ||| | |||| | ||||| |||||||| |||||||||||||
Sbjct 370139 GCCGC-GTAACTAGTGAGCATGCCGGAGTCTCATTCGTTAT------TAACCAGACAAAT 370191
Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251
|||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct 370192 TACTCCACCAAATAAGAAC----ATGCACCACCACCTACAGAATCAAGAAAGAGCTATCA 370247
Query 252 ATCTGTC 258
|||||||
Sbjct 370248 ATCTGTC 370254
>seq12279
Length=236785
Score = 167 bits (184), Expect = 4e-39
Identities = 97/100 (97%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 105166 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 105225
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| |||||| |||||||||||||||||||||
Sbjct 105226 ACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 105265
>seq9607
Length=1008477
Score = 129 bits (142), Expect = 9e-28
Identities = 82/89 (92%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||
Sbjct 114045 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTGAGAACGGCCGCGC 113986
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCT 247
||||||||||| ||||| ||||||||||
Sbjct 113985 ACCACCACCCACAGAATGGAGAAAGAGCT 113957
>seq7103
Length=1370810
Score = 109 bits (120), Expect = 9e-22
Identities = 84/100 (84%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||| || |||| |||||| |||||||| | | ||||||||||||| ||||| ||
Sbjct 28853 GTCTCGTTTGTAATCGAAATTAATCAGACAAACCTCCCCACCAACTAAGACTGGCCACGC 28794
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||| ||| || ||| || ||||||||| |||||||||||
Sbjct 28793 ACCAGCACTCACAGACTCGAGAAAGAGCCATCAATCTGTC 28754
>seq10179
Length=4646527
Score = 102 bits (112), Expect = 1e-19
Identities = 64/69 (93%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||
Sbjct 657521 GTCTCGTTCGTTATCGGAATTAATCAGACAAACCGCTCCACCGACTAAGAACGGACATGC 657580
Query 219 ACCACCACC 227
|||||||||
Sbjct 657581 ACCACCACC 657589
>seq9249
Length=12793748
Score = 75.2 bits (82), Expect = 2e-11
Identities = 65/81 (80%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202
|| |||||| | | | ||| || |||||| ||||||||||||||||| |||||||||
Sbjct 6467503 TAGTTAGCATGCTGGAGGCTCATTTGTTATCTGAATTAACCAGACAAATTGCTCCACCAA 6467444
Query 203 CTAAGAACGGCCATGCACCAC 223
||||||| | |||||||||
Sbjct 6467443 GTAAGAACAGATATGCACCAC 6467423
>seq5659
Length=1470972
Score = 73.4 bits (80), Expect = 6e-11
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
|| |||||||| | |||||||| |||| | ||||| ||| ||||||||||||||||| ||
Sbjct 800942 TCTGTCAGTGTGGTGCGCGTGCAGCCCCGGACATCGAAGAGCATCACAGACCTGTTACTG 801001
Query 72 CCTCAAACTT 81
||||| |||
Sbjct 801002 -CTCAATCTT 801010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796671710220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |