Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10751 181 2e-43 seq12279 167 4e-39 seq9607 129 9e-28 seq7103 109 9e-22 seq10179 102 1e-19 seq9249 75.2 2e-11 seq5659 73.4 6e-11 >seq10751 Length=374895 Score = 181 bits (200), Expect = 2e-43 Identities = 192/247 (78%), Gaps = 17/247 (7%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 370021 TCATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 370079 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAAC-CATA 131 || || | |||||| | |||| | |||||||||||||| ||||| | | || Sbjct 370080 AATCT-CGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAGATGAAAGCCAACCGCACAGG 370138 Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | || | ||| | |||| | ||||| |||||||| ||||||||||||| Sbjct 370139 GCCGC-GTAACTAGTGAGCATGCCGGAGTCTCATTCGTTAT------TAACCAGACAAAT 370191 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 |||||||||| ||||||| ||||||||||||| | ||||||||||||||||||||| Sbjct 370192 TACTCCACCAAATAAGAAC----ATGCACCACCACCTACAGAATCAAGAAAGAGCTATCA 370247 Query 252 ATCTGTC 258 ||||||| Sbjct 370248 ATCTGTC 370254 >seq12279 Length=236785 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 105166 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 105225 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||| ||||||||||||||||||||| Sbjct 105226 ACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 105265 >seq9607 Length=1008477 Score = 129 bits (142), Expect = 9e-28 Identities = 82/89 (92%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || Sbjct 114045 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTGAGAACGGCCGCGC 113986 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||||||||| ||||| |||||||||| Sbjct 113985 ACCACCACCCACAGAATGGAGAAAGAGCT 113957 >seq7103 Length=1370810 Score = 109 bits (120), Expect = 9e-22 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||| || |||| |||||| |||||||| | | ||||||||||||| ||||| || Sbjct 28853 GTCTCGTTTGTAATCGAAATTAATCAGACAAACCTCCCCACCAACTAAGACTGGCCACGC 28794 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| ||| || ||| || ||||||||| ||||||||||| Sbjct 28793 ACCAGCACTCACAGACTCGAGAAAGAGCCATCAATCTGTC 28754 >seq10179 Length=4646527 Score = 102 bits (112), Expect = 1e-19 Identities = 64/69 (93%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| ||||| Sbjct 657521 GTCTCGTTCGTTATCGGAATTAATCAGACAAACCGCTCCACCGACTAAGAACGGACATGC 657580 Query 219 ACCACCACC 227 ||||||||| Sbjct 657581 ACCACCACC 657589 >seq9249 Length=12793748 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 || |||||| | | | ||| || |||||| ||||||||||||||||| ||||||||| Sbjct 6467503 TAGTTAGCATGCTGGAGGCTCATTTGTTATCTGAATTAACCAGACAAATTGCTCCACCAA 6467444 Query 203 CTAAGAACGGCCATGCACCAC 223 ||||||| | ||||||||| Sbjct 6467443 GTAAGAACAGATATGCACCAC 6467423 >seq5659 Length=1470972 Score = 73.4 bits (80), Expect = 6e-11 Identities = 59/70 (84%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 || |||||||| | |||||||| |||| | ||||| ||| ||||||||||||||||| || Sbjct 800942 TCTGTCAGTGTGGTGCGCGTGCAGCCCCGGACATCGAAGAGCATCACAGACCTGTTACTG 801001 Query 72 CCTCAAACTT 81 ||||| ||| Sbjct 801002 -CTCAATCTT 801010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796671710220