Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq6658 84.2 3e-14 seq11159 75.2 1e-11 >seq6658 Length=7564740 Score = 84.2 bits (92), Expect = 3e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 7562184 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTCAGGCG 7562126 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||||||||| |||| ||||| Sbjct 7562125 ACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 7562086 >seq11159 Length=3978678 Score = 75.2 bits (82), Expect = 1e-11 Identities = 78/100 (78%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||| |||||||||| | | ||||||||| |||||||| | | |||||| |||| Sbjct 3901954 AAACTCACAAAATAGGACCAGA-GTCCTATTCCATTATTCCTAGTTGCGGTATTCAGGCG 3901896 Query 70 T--AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||| ||||||| |||| ||||| Sbjct 3901895 ACCAGGCCTGCTTTGAACACTGTAATTTTTTCAAAGTAAA 3901856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595104169080