Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq6658 100 3e-19 seq11159 86.0 6e-15 >seq6658 Length=7564740 Score = 100 bits (110), Expect = 3e-19 Identities = 131/179 (73%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 ||||||||||||||||||||| |||||||||||||| | || |||||| | | | Sbjct 7562086 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 7562145 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT----TTCTAGGACCGCCCGTAA 126 ||||||| ||||||||| | |||||||||||||| ||| |||| || | | | Sbjct 7562146 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTTCTCTGAACTGGGGCCA 7562204 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 7562205 TGATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 7562263 >seq11159 Length=3978678 Score = 86.0 bits (94), Expect = 6e-15 Identities = 83/103 (81%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT--TTGCTCGAATACATTACCATG 70 |||||||||||||||||| || ||||||||||||||| | || |||||| | | | Sbjct 3901856 TTTACTTTGAAAAAATTACAGTGTTCAAAGCAGGCCTGGTCGCCTGAATACCGCAACTAG 3901915 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT-AGGTTTCT 112 ||||||| ||||||||| | ||| ||||||||| || ||||| Sbjct 3901916 GAATAATGGAATAGGAC-TCTGGTCCTATTTTGTGAGTTTTCT 3901957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511917564800