Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq6658 100 3e-19
seq11159 86.0 6e-15
>seq6658
Length=7564740
Score = 100 bits (110), Expect = 3e-19
Identities = 131/179 (73%), Gaps = 7/179 (4%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70
||||||||||||||||||||| |||||||||||||| | || |||||| | | |
Sbjct 7562086 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 7562145
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT----TTCTAGGACCGCCCGTAA 126
||||||| ||||||||| | |||||||||||||| ||| |||| || | | |
Sbjct 7562146 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTTCTCTGAACTGGGGCCA 7562204
Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|||| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 7562205 TGATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 7562263
>seq11159
Length=3978678
Score = 86.0 bits (94), Expect = 6e-15
Identities = 83/103 (81%), Gaps = 4/103 (4%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT--TTGCTCGAATACATTACCATG 70
|||||||||||||||||| || ||||||||||||||| | || |||||| | | |
Sbjct 3901856 TTTACTTTGAAAAAATTACAGTGTTCAAAGCAGGCCTGGTCGCCTGAATACCGCAACTAG 3901915
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT-AGGTTTCT 112
||||||| ||||||||| | ||| ||||||||| || |||||
Sbjct 3901916 GAATAATGGAATAGGAC-TCTGGTCCTATTTTGTGAGTTTTCT 3901957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511917564800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |