Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10751 150 3e-34 seq5659 78.8 2e-12 >seq10751 Length=374895 Score = 150 bits (166), Expect = 3e-34 Identities = 192/259 (74%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 370118 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 370061 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||| ||| | || || || | Sbjct 370060 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGAGTGGATCAGCGTGTGTCTAC 370001 Query 191 CCTTGGCCG-GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||||||||| ||| |||||||| | | || | | ||||| | |||| | | ||| Sbjct 370000 CCTTGGCCGATCAGGCCTGGGTAACCCGCTGAACCCCACTCGTGATAGGGACTGGGGATT 369941 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| | | | |||||||||| | |||||||| |||| ||| || | |||| Sbjct 369940 GCAATTATTTCCCATGAACGAGGAATTCTCTGTAAGCGCAGGTCACAAGCTCGTGCTGAT 369881 Query 310 TACGTCCCTGCCCTTTGTA 328 || ||||||| ||||||| Sbjct 369880 TAACTCCCTGCTCTTTGTA 369862 >seq5659 Length=1470972 Score = 78.8 bits (86), Expect = 2e-12 Identities = 60/70 (86%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 ||| ||||| || ||||||||||||||||| ||| ||||| | |||| |||||||| | | Sbjct 801010 AAGATTGAG-CAGTAACAGGTCTGTGATGCTCTTCGATGTCCGGGGCTGCACGCGCACCA 800952 Query 165 CACTGACAGA 174 |||||||||| Sbjct 800951 CACTGACAGA 800942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947042575360