Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq10751 150 3e-34
seq5659 78.8 2e-12
>seq10751
Length=374895
Score = 150 bits (166), Expect = 3e-34
Identities = 192/259 (74%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 370118 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 370061
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||| ||| ||| | || || || |
Sbjct 370060 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGAGTGGATCAGCGTGTGTCTAC 370001
Query 191 CCTTGGCCG-GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
||||||||| ||| |||||||| | | || | | ||||| | |||| | | |||
Sbjct 370000 CCTTGGCCGATCAGGCCTGGGTAACCCGCTGAACCCCACTCGTGATAGGGACTGGGGATT 369941
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||||| | | | |||||||||| | |||||||| |||| ||| || | ||||
Sbjct 369940 GCAATTATTTCCCATGAACGAGGAATTCTCTGTAAGCGCAGGTCACAAGCTCGTGCTGAT 369881
Query 310 TACGTCCCTGCCCTTTGTA 328
|| ||||||| |||||||
Sbjct 369880 TAACTCCCTGCTCTTTGTA 369862
>seq5659
Length=1470972
Score = 78.8 bits (86), Expect = 2e-12
Identities = 60/70 (86%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164
||| ||||| || ||||||||||||||||| ||| ||||| | |||| |||||||| | |
Sbjct 801010 AAGATTGAG-CAGTAACAGGTCTGTGATGCTCTTCGATGTCCGGGGCTGCACGCGCACCA 800952
Query 165 CACTGACAGA 174
||||||||||
Sbjct 800951 CACTGACAGA 800942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947042575360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |