Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq10883 569 7e-160
seq5759 488 2e-135
seq12961 444 2e-122
seq934 437 3e-120
seq4807 421 2e-115
seq10751 192 2e-46
seq16509 131 5e-28
>seq10883
Length=362615
Score = 569 bits (630), Expect = 7e-160
Identities = 453/540 (84%), Gaps = 15/540 (3%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 215822 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 215763
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| ||
Sbjct 215762 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 215703
Query 127 G-GCCCGCGAAGGAC-----CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT--- 174
||||| || | ||| ||||||||| | | || | | | |
Sbjct 215702 ACGCCCGGCGGGGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTCC 215643
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233
|||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| ||||
Sbjct 215642 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGG 215583
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
| |||||||||||||||||||||||| ||| |||||| | | |||||||||||||||
Sbjct 215582 C--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 215525
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 215524 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 215465
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
|| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 215464 AAGGGGGTATATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 215405
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215404 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 215345
Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 215344 TCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 215285
>seq5759
Length=17482
Score = 488 bits (540), Expect = 2e-135
Identities = 417/510 (82%), Gaps = 15/510 (3%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 1581 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 1522
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| ||
Sbjct 1521 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 1462
Query 127 G-GCCCGCGAAGGAC-----CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT--- 174
||||| || | ||| ||||||||| | | || | | | |
Sbjct 1461 ACGCCCGGCGGGGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTCC 1402
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233
|||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| ||||
Sbjct 1401 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGG 1342
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
| |||||||||||||||||||||||| ||| |||||| | | |||||||||||||||
Sbjct 1341 C--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 1284
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1283 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 1224
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
|| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1223 AAGGGGGTATATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 1164
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473
||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||
Sbjct 1163 ATGACGAGGCATTTGGCTATCTTAACAGAACCATAGCCTCTCCCGCCGTTTACCCGCGCT 1104
Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGA 503
| |||||||||||||||||||||||||||
Sbjct 1103 TCATTGAATTTCTTCACTTTGACATTCAGA 1074
>seq12961
Length=193462
Score = 444 bits (492), Expect = 2e-122
Identities = 404/502 (80%), Gaps = 19/502 (4%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 192031 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 192090
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| ||||||
Sbjct 192091 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC-----CCCGGAAA 192145
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAA--ATGGTCGG--TGAAGACCAGTTCCGCT--T 180
|| ||| || ||| ||||||||| | | | | || | | ||| | |
Sbjct 192146 GGGCCG----GGCGCTTGACGCCAGAAGCGAGAGCCCGCTTGGGGCTCGCCTCCCCACCT 192201
Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTC 239
|| | ||||| |||||| |||||| ||||||||||||||| ||| |||| | |||
Sbjct 192202 CACCGGGTAAGTGAAAAAATGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGGC--CTC 192259
Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299
||||||||||||||||||||| ||| |||||| | | |||||||||||||||||||||
Sbjct 192260 CCACTTATTCTACACCTCTCATGTCTGTTCACAGTGCCAGACTAGAGTCAAGCTCAACAG 192319
Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359
|||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||
Sbjct 192320 GGTCTTCTTTCCCCGCTGATTCTGCCAAGGCCGTTCCCTTGGCTGTGGTTTCGCAAGGGG 192379
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||
Sbjct 192380 GTATATAGGGACAGTGGGAATCTCGTTCATCCATTCACACGCGACACTAATTAGATGACG 192439
Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479
||||||||||||| ||||| ||| ||||||||| ||||| |||| ||| |||| |||
Sbjct 192440 AGGCATTTGGCTAGTTTAAGGGAGCCATAGTTACCCCCGCTGTTTGCCCTCGCTACATTG 192499
Query 480 AATTTCTTC-ACTTTGACATTC 500
||||| ||| ||||| ||||||
Sbjct 192500 AATTTTTTCAACTTTAACATTC 192521
>seq934
Length=61422
Score = 437 bits (484), Expect = 3e-120
Identities = 388/480 (81%), Gaps = 15/480 (3%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 5555 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 5496
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| ||
Sbjct 5495 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 5436
Query 127 G-GCCCGCGAAGGAC-----CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT--- 174
||||| || | ||| ||||||||| | | || | | | |
Sbjct 5435 ACGCCCGGCGGGGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTCC 5376
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233
|||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| ||||
Sbjct 5375 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGG 5316
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
| |||||||||||||||||||||||| ||| |||||| | | |||||||||||||||
Sbjct 5315 C--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 5258
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 5257 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 5198
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
|| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 5197 AAGGGGGTATATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 5138
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473
||||||||||||||||||| ||||| ||| ||| ||||| |||||||||| ||| ||||
Sbjct 5137 ATGACGAGGCATTTGGCTAGTTTAAGGGAGCCATTGTTACCCCCGCCGTTTGCCCTCGCT 5078
>seq4807
Length=20766
Score = 421 bits (466), Expect = 2e-115
Identities = 388/485 (80%), Gaps = 16/485 (3%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 3316 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 3257
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| ||
Sbjct 3256 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 3197
Query 127 G-GCCCGCGAAGGAC-----CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT--- 174
||||| || | ||| ||||||||| | | || | | | |
Sbjct 3196 ACGCCCGGCGGGGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTCC 3137
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233
|||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| ||||
Sbjct 3136 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGG 3077
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
| |||||||||||||||||||||||| ||| |||||| | | |||||||||||||||
Sbjct 3076 C--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 3019
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3018 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 2959
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
|| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2958 AAGGGGGTATATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 2899
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473
||||||||||||||||||| |||||||| || ||| |||||| |||||||| ||
Sbjct 2898 ATGACGAGGCATTTGGCTATTATAAGAGAGCTGTAAATACCCCCGCC-ATTACCCGCTCT 2840
Query 474 TGGTT 478
||||
Sbjct 2839 GGGTT 2835
Score = 167 bits (184), Expect = 8e-39
Identities = 97/100 (97%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1370 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTT 1311
Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||| |||||||||
Sbjct 1310 GACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1271
>seq10751
Length=374895
Score = 192 bits (212), Expect = 2e-46
Identities = 253/350 (72%), Gaps = 38/350 (11%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||| | || | || ||||||| |||| |||| | | |||||| |||| |||||
Sbjct 368204 CTTCTGCACCACGGAAGGTTTCTGTCCTCCCTGAGCTCGCTTTAGGAAACCTACGTTACT 368263
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || ||| ||||||
Sbjct 368264 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTT-----CCCGGA-- 368316
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGA-AGACCAGTT----------- 174
|| | | || ||| ||||||||| | || || ||| ||
Sbjct 368317 GGGCTG----GGCGCTTGACGCCAGAA--------GCGAGAGCCCATTTGGGGCTCGCCT 368364
Query 175 --CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGA 231
|||| | | | ||||| ||||||||||||| ||||||||||||||| || |||||
Sbjct 368365 CCCCGCCTTACCGGGTAAGTGAAAAAACGATAAGATTAGTGGTATTTCACTGGCTGCCGA 368424
Query 232 AACGG----CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGT 287
| | || ||||||||||||||||||| | ||| |||||| | || ||||||
Sbjct 368425 GGCTGAGGCCTTCCACTTATTCTACACCTCTGATGTCTCTTCACAGTGCTAGATTAGAGT 368484
Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337
|||||||||||||||||||||||| | ||||||| ||||||| |||||||
Sbjct 368485 CAAGCTCAACAGGGTCTTCTTTCCTCACTGATTCTGCCAAGCTCGTTCCC 368534
>seq16509
Length=2056469
Score = 131 bits (144), Expect = 5e-28
Identities = 114/138 (83%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT-GGCTGTGGTTTCGCTAGATAG 360
||||||| | | ||||||| | ||||||| |||||| |||||||||||| | | |
Sbjct 1486266 TCTTCTT-CTTCACTGATTCTTCTAAGCCCGCTCCCTTCGGCTGTGGTTTCTCGGGGG-G 1486323
Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420
| ||| |||||| ||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1486324 CATATAAGGACAGCGGGAAATTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGA 1486383
Query 421 GGCATTTGGCTACCTTAA 438
|||||||||| ||||||
Sbjct 1486384 GGCATTTGGCCGCCTTAA 1486401
Score = 100 bits (110), Expect = 9e-19
Identities = 78/93 (84%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
|||||| | || ||||||||| ||||||| || | ||| |||||||||||||||| |
Sbjct 1488418 TTAAGAAACCCAGAGTTACTCCACCCGTTTAGCCACACTTCATTGAATTTCTTCACTTCG 1488477
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCG 527
|||| |||||||||| |||||||||||||| ||
Sbjct 1488478 ACATCCAGAGCACTGTGCAGAAATCACATTACG 1488510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634928229760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |