Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10883 569 7e-160 seq5759 488 2e-135 seq12961 444 2e-122 seq934 437 3e-120 seq4807 421 2e-115 seq10751 192 2e-46 seq16509 131 5e-28 >seq10883 Length=362615 Score = 569 bits (630), Expect = 7e-160 Identities = 453/540 (84%), Gaps = 15/540 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 215822 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 215763 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| || Sbjct 215762 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 215703 Query 127 G-GCCCGCGAAGGAC-----CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT--- 174 ||||| || | ||| ||||||||| | | || | | | | Sbjct 215702 ACGCCCGGCGGGGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTCC 215643 Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233 |||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| |||| Sbjct 215642 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGG 215583 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||||||||||||||||||||||| ||| |||||| | | ||||||||||||||| Sbjct 215582 C--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 215525 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 215524 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 215465 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 215464 AAGGGGGTATATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 215405 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 215404 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 215345 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 215344 TCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 215285 >seq5759 Length=17482 Score = 488 bits (540), Expect = 2e-135 Identities = 417/510 (82%), Gaps = 15/510 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 1581 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 1522 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| || Sbjct 1521 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 1462 Query 127 G-GCCCGCGAAGGAC-----CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT--- 174 ||||| || | ||| ||||||||| | | || | | | | Sbjct 1461 ACGCCCGGCGGGGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTCC 1402 Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233 |||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| |||| Sbjct 1401 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGG 1342 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||||||||||||||||||||||| ||| |||||| | | ||||||||||||||| Sbjct 1341 C--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 1284 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1283 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 1224 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1223 AAGGGGGTATATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 1164 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 ||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct 1163 ATGACGAGGCATTTGGCTATCTTAACAGAACCATAGCCTCTCCCGCCGTTTACCCGCGCT 1104 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGA 503 | ||||||||||||||||||||||||||| Sbjct 1103 TCATTGAATTTCTTCACTTTGACATTCAGA 1074 >seq12961 Length=193462 Score = 444 bits (492), Expect = 2e-122 Identities = 404/502 (80%), Gaps = 19/502 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 192031 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 192090 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| Sbjct 192091 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC-----CCCGGAAA 192145 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAA--ATGGTCGG--TGAAGACCAGTTCCGCT--T 180 || ||| || ||| ||||||||| | | | | || | | ||| | | Sbjct 192146 GGGCCG----GGCGCTTGACGCCAGAAGCGAGAGCCCGCTTGGGGCTCGCCTCCCCACCT 192201 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTC 239 || | ||||| |||||| |||||| ||||||||||||||| ||| |||| | ||| Sbjct 192202 CACCGGGTAAGTGAAAAAATGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGGC--CTC 192259 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 ||||||||||||||||||||| ||| |||||| | | ||||||||||||||||||||| Sbjct 192260 CCACTTATTCTACACCTCTCATGTCTGTTCACAGTGCCAGACTAGAGTCAAGCTCAACAG 192319 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| || Sbjct 192320 GGTCTTCTTTCCCCGCTGATTCTGCCAAGGCCGTTCCCTTGGCTGTGGTTTCGCAAGGGG 192379 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 ||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct 192380 GTATATAGGGACAGTGGGAATCTCGTTCATCCATTCACACGCGACACTAATTAGATGACG 192439 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 ||||||||||||| ||||| ||| ||||||||| ||||| |||| ||| |||| ||| Sbjct 192440 AGGCATTTGGCTAGTTTAAGGGAGCCATAGTTACCCCCGCTGTTTGCCCTCGCTACATTG 192499 Query 480 AATTTCTTC-ACTTTGACATTC 500 ||||| ||| ||||| |||||| Sbjct 192500 AATTTTTTCAACTTTAACATTC 192521 >seq934 Length=61422 Score = 437 bits (484), Expect = 3e-120 Identities = 388/480 (81%), Gaps = 15/480 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 5555 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 5496 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| || Sbjct 5495 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 5436 Query 127 G-GCCCGCGAAGGAC-----CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT--- 174 ||||| || | ||| ||||||||| | | || | | | | Sbjct 5435 ACGCCCGGCGGGGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTCC 5376 Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233 |||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| |||| Sbjct 5375 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGG 5316 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||||||||||||||||||||||| ||| |||||| | | ||||||||||||||| Sbjct 5315 C--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 5258 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 5257 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 5198 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 5197 AAGGGGGTATATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 5138 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 ||||||||||||||||||| ||||| ||| ||| ||||| |||||||||| ||| |||| Sbjct 5137 ATGACGAGGCATTTGGCTAGTTTAAGGGAGCCATTGTTACCCCCGCCGTTTGCCCTCGCT 5078 >seq4807 Length=20766 Score = 421 bits (466), Expect = 2e-115 Identities = 388/485 (80%), Gaps = 16/485 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 3316 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACT 3257 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| || Sbjct 3256 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 3197 Query 127 G-GCCCGCGAAGGAC-----CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT--- 174 ||||| || | ||| ||||||||| | | || | | | | Sbjct 3196 ACGCCCGGCGGGGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTCC 3137 Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233 |||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| |||| Sbjct 3136 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGG 3077 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||||||||||||||||||||||| ||| |||||| | | ||||||||||||||| Sbjct 3076 C--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 3019 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3018 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 2959 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2958 AAGGGGGTATATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 2899 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 ||||||||||||||||||| |||||||| || ||| |||||| |||||||| || Sbjct 2898 ATGACGAGGCATTTGGCTATTATAAGAGAGCTGTAAATACCCCCGCC-ATTACCCGCTCT 2840 Query 474 TGGTT 478 |||| Sbjct 2839 GGGTT 2835 Score = 167 bits (184), Expect = 8e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1370 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTT 1311 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||| ||||||||| Sbjct 1310 GACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1271 >seq10751 Length=374895 Score = 192 bits (212), Expect = 2e-46 Identities = 253/350 (72%), Gaps = 38/350 (11%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||| | || | || ||||||| |||| |||| | | |||||| |||| ||||| Sbjct 368204 CTTCTGCACCACGGAAGGTTTCTGTCCTCCCTGAGCTCGCTTTAGGAAACCTACGTTACT 368263 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || ||| |||||| Sbjct 368264 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTT-----CCCGGA-- 368316 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGA-AGACCAGTT----------- 174 || | | || ||| ||||||||| | || || ||| || Sbjct 368317 GGGCTG----GGCGCTTGACGCCAGAA--------GCGAGAGCCCATTTGGGGCTCGCCT 368364 Query 175 --CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGA 231 |||| | | | ||||| ||||||||||||| ||||||||||||||| || ||||| Sbjct 368365 CCCCGCCTTACCGGGTAAGTGAAAAAACGATAAGATTAGTGGTATTTCACTGGCTGCCGA 368424 Query 232 AACGG----CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGT 287 | | || ||||||||||||||||||| | ||| |||||| | || |||||| Sbjct 368425 GGCTGAGGCCTTCCACTTATTCTACACCTCTGATGTCTCTTCACAGTGCTAGATTAGAGT 368484 Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 |||||||||||||||||||||||| | ||||||| ||||||| ||||||| Sbjct 368485 CAAGCTCAACAGGGTCTTCTTTCCTCACTGATTCTGCCAAGCTCGTTCCC 368534 >seq16509 Length=2056469 Score = 131 bits (144), Expect = 5e-28 Identities = 114/138 (83%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT-GGCTGTGGTTTCGCTAGATAG 360 ||||||| | | ||||||| | ||||||| |||||| |||||||||||| | | | Sbjct 1486266 TCTTCTT-CTTCACTGATTCTTCTAAGCCCGCTCCCTTCGGCTGTGGTTTCTCGGGGG-G 1486323 Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 | ||| |||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1486324 CATATAAGGACAGCGGGAAATTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGA 1486383 Query 421 GGCATTTGGCTACCTTAA 438 |||||||||| |||||| Sbjct 1486384 GGCATTTGGCCGCCTTAA 1486401 Score = 100 bits (110), Expect = 9e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||| | || ||||||||| ||||||| || | ||| |||||||||||||||| | Sbjct 1488418 TTAAGAAACCCAGAGTTACTCCACCCGTTTAGCCACACTTCATTGAATTTCTTCACTTCG 1488477 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 |||| |||||||||| |||||||||||||| || Sbjct 1488478 ACATCCAGAGCACTGTGCAGAAATCACATTACG 1488510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634928229760