Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq12000 89.7 2e-12 >seq12000 Length=302905 Score = 89.7 bits (98), Expect = 2e-12 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| | ||| || |||||| | || ||| || | |||||||| | || |||||| Sbjct 155238 CTCGATGAGCATCCCGATGGTCATTCTGGAGGGGAAGCCGTGCGGGTTGAAGAGGATGTC 155179 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103 || ||| |||| | || |||| ||||||||||| ||| | ||| ||||| | | Sbjct 155178 CGGGGTCATGCCGCTCTCGGTGAACGGCATGTCCTC--GGTGGGCCA-CAGGCGGCTCAG 155122 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 || ||||||||| |||||||| ||| ||||||||| || Sbjct 155121 GATGCCCTTCTGACCGTGGCGACTGGCGAACTTGTCTCC 155083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084284440202760