Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq100126 118 3e-24 seq75489 89.7 2e-15 >seq100126 Length=1550 Score = 118 bits (130), Expect = 3e-24 Identities = 91/108 (84%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 130 CCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTAT 189 ||||||||||||||||||||| |||||||||||||||| | ||||||||| || | Sbjct 1550 CCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAAGCACAGAA 1491 Query 190 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 ||||||| ||||||||||||||||| |||||||||| | |||||| Sbjct 1490 AGTACCATCTAAAGTTGATAGGGCAGACATTTGAATGAGACGTCGCCG 1443 >seq75489 Length=2393 Score = 89.7 bits (98), Expect = 2e-15 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 426 TCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 485 |||||||||||||||| | | | ||||||||| |||||| |||||||||||||||| Sbjct 2027 TCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACTTGCATGTCTTAATCTTTGAGACA 1968 Query 486 AGCATATGACTACTGGCAG 504 |||||||| |||||||||| Sbjct 1967 AGCATATG-CTACTGGCAG 1950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1507912476928