Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02]
164,693 sequences; 563,609,416 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq67842 89.7 2e-12
seq135297 86.0 3e-11
>seq67842
Length=11392
Score = 89.7 bits (98), Expect = 2e-12
Identities = 117/159 (74%), Gaps = 6/159 (4%)
Strand=Plus/Minus
Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046
||||| || ||| || ||||||||| || ||| || | || ||||| | | ||||||
Sbjct 4562 CTCGATCAGCATCCCGATGGTCATGCGAGAGGGGAAGCCGTGGGGGTTGAACAGGATGTC 4503
Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103
||||| | |||| | | |||||||||||||||||| | | ||| ||||| |
Sbjct 4502 GGGCGCCATGCCGCTCTCTGTGAAGGGCATGTCCTCGGCG--GGCCA-CAGGCGACTCAG 4446
Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142
|| ||| ||||| |||||||||||| |||||||| ||
Sbjct 4445 GATGCCTTTCTGACCGTGGCGGCTGGCAAACTTGTCGCC 4407
>seq135297
Length=20122
Score = 86.0 bits (94), Expect = 3e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131
||||| || ||||| |||| | |||| ||||| || | |||| ||| ||| || ||
Sbjct 6782 GGCGTTGATGATCTCTTTGATGCGAGGCACCCCCAGAGTGATGTTCATGGACGCCACACC 6841
Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186
||||||||||||||| | ||||||| ||| ||| ||||| ||||||| ||||
Sbjct 6842 GGCAAAGTGGAAGGTTTTCAGGGTCATCTGAGTGCCAGGCTCCCCGATGCTCTGG 6896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2080232836866014
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |