Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq26 138 5e-30 seq12 120 1e-24 >seq26 Length=514401 Score = 138 bits (152), Expect = 5e-30 Identities = 102/119 (86%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| ||||||||||||||||||| |||| |||| |||||||| ||||||||||| Sbjct 60096 GTTGGTGTCCGAAAGATGGTGAACTATCCCTGGGCAGGGCGAAGCCAGGGGAAACTCTGG 60155 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 60156 TGGAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 60214 >seq12 Length=18396836 Score = 120 bits (132), Expect = 1e-24 Identities = 94/111 (85%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG-AAACTCTGGTGGAGGCT 632 |||||||||| |||| ||||||| ||||| |||||||| || ||||||||||||| || Sbjct 16973155 CGAAAGATGGCGAACAATGCCTGGTTAGGGCGAAGCCAGGGGGAAACTCTGGTGGATGCC 16973096 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||| ||| |||||||||| ||||| | ||||||||||||||| Sbjct 16973095 CGCAGCGGTCCTGACGTGCAAATCAGTCGTCCGACCTGGGTATAGGGGCGA 16973045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079364157650