Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq17 104 1e-20 seq11 71.6 6e-11 >seq17 Length=16464107 Score = 104 bits (114), Expect = 1e-20 Identities = 85/102 (83%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| || Sbjct 791357 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCAGGCGAAGAGGGAAGAGCCCATCG 791416 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||| |||||| | | | || |||| |||||||||| Sbjct 791417 -CGAATTCCCGCCTGTCTGGCGATCGAGGGAAATGTGGCGTA 791457 >seq11 Length=20528231 Score = 71.6 bits (78), Expect = 6e-11 Identities = 56/66 (85%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||||| | ||||||||| |||||| | ||||| ||| |||||||||||||| | Sbjct 19262885 GGAAAATAAACTCAACAGGATTCC-TCAGTAGCAGCGAGCGAAGAGGGAAGAGCCCAGTG 19262827 Query 61 CCGAAT 66 || ||| Sbjct 19262826 CCAAAT 19262821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230335971120