Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq27987 320 5e-85 seq26223 132 2e-28 >seq27987 Length=209 Score = 320 bits (354), Expect = 5e-85 Identities = 196/208 (94%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 || ||||||||| |||| ||| ||||||||||||||||||||||| | ||||||||| Sbjct 5 GAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCACT 61 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 121 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 122 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGA 181 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCA 392 ||||||||||||||||||||||||||| Sbjct 182 CAGGGACAGTGGGAATCTCGTTAATCCA 209 >seq26223 Length=220 Score = 132 bits (146), Expect = 2e-28 Identities = 90/101 (89%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 101 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 42 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 107 |||||||||||||||||||||||||||||||||||||||| Sbjct 41 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634715277664