Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq88411 104 2e-20
seq10895 75.2 1e-11
>seq88411
Length=793
Score = 104 bits (114), Expect = 2e-20
Identities = 130/175 (74%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70
||||||||||||||||||||| |||||||||||||| | || |||||| | | |
Sbjct 238 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 179
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| ||||||||| | |||||||||||||| || |||| || | | |||||
Sbjct 178 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGT-GGGTTCTCTGAACTGGGGCCATGAT 121
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|| | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 120 TAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 66
>seq10895
Length=7650
Score = 75.2 bits (82), Expect = 1e-11
Identities = 79/101 (78%), Gaps = 5/101 (5%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| | || |||||| | |
Sbjct 4417 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCAGTCAACT-GAATACCGCAGCTA 4359
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
||| |||| ||| ||||| | ||||| ||| |||| |||||
Sbjct 4358 GGAGTAATGGAACAGGAC-TCCGGTTTTATGTTGTTGGTTT 4319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511521280640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |