Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq6795 77.0 5e-12 seq3373 75.2 2e-11 >seq6795 Length=122905 Score = 77.0 bits (84), Expect = 5e-12 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 48 CTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC 107 |||| || || || |||||||||||||||| |||||||| ||||| ||||||||||| Sbjct 102668 CTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAAAGCCTCTAAGTC 102609 Query 108 AGAATCC 114 ||||||| Sbjct 102608 AGAATCC 102602 >seq3373 Length=3264 Score = 75.2 bits (82), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1366 GCGAAACTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818434049024