Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1055 89.7 2e-12 >seq1055 Length=24892 Score = 89.7 bits (98), Expect = 2e-12 Identities = 106/141 (75%), Gaps = 6/141 (4%) Strand=Plus/Minus Query 449005 GGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGC 449064 ||||||||| || ||| || | |||||||| | | |||||| || ||| |||| | | Sbjct 4180 GGTCATGCGGGAGGGGAAGCCGTGCGGGTTGAACAGGATGTCCGGGGTCATGCCGCTCTC 4121 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT---GACGCCCTTCTGGCCGTG 449121 | |||||||||||||||| | | ||| ||| | | | || ||||||||||||||| Sbjct 4120 GGTGAAGGGCATGTCCTC--CGCCGGCCA-CAGACGGCTCAGGATGCCCTTCTGGCCGTG 4064 Query 449122 GCGGCTGCAGAACTTGTCCCC 449142 ||||||| |||||||| || Sbjct 4063 GCGGCTGGCAAACTTGTCGCC 4043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2082098309711768