Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1869 134 1e-29 >seq1869 Length=76927 Score = 134 bits (148), Expect = 1e-29 Identities = 137/177 (77%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT----GCTCGAATACATTACCA 68 ||||||||||||||||||||| | ||||||||||| || ||| ||||| || Sbjct 71863 TTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCTGTTAAAAGCTTGAATATTCGTGCA 71804 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 |||||||||| ||||||| || || ||||||||||| ||||| | | | | ||||| Sbjct 71803 TGGAATAATAAAATAGGAAGT-CGTTTCTATTTTGTTGGTTTTTGGAAATCGACTTAATG 71745 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || |||| ||| ||||||||| | |||||||| | || |||||||||||||||| Sbjct 71744 ATTAATAGGGACAGTCGGGGGCATTAGTATTCAGACGACAGAGGTGAAATTCTTGGA 71688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511954075360