Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2823 84.2 4e-14 >seq2823 Length=178462 Score = 84.2 bits (92), Expect = 4e-14 Identities = 96/125 (77%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| |||||||||||| | |||||| | ||||| || | || |||| || || | Sbjct 62132 GTATGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGCATGTGCTTGGCTGAGGAGCCACT 62075 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||||| || |||||||| ||||| ||||||||||||||||| |||| Sbjct 62074 GGTGCGAAGCTACCATTTGTGGGATTATGACTGAAATCCTCTAAGTCAGAATCC-TGCCT 62016 Query 121 GAACG 125 |||| Sbjct 62015 AAACG 62011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819125576192