Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq36 522 8e-146 seq527 399 7e-109 seq23 390 3e-106 seq319 333 8e-89 seq14 127 6e-27 seq12 114 4e-23 seq7590 105 2e-20 seq28 87.8 5e-15 seq314 82.4 2e-13 seq40 75.2 3e-11 >seq36 Length=22739634 Score = 522 bits (578), Expect = 8e-146 Identities = 403/470 (86%), Gaps = 13/470 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | || |||||| |||| |||||||||||||||||| Sbjct 2122147 GTACTCATTCCAATTACCAGACTCTAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 2122089 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2122088 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2122029 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||| Sbjct 2122028 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 2121969 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 2121968 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 2121909 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC--- 294 | | |||| |||||| ||| |||||| |||||||| | | ||| | | || || Sbjct 2121908 CGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GTAGCAACGGGCAGAGCCCG 2121851 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352 || | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| Sbjct 2121850 TGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 2121791 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||||| |||||||||| |||| |||||| |||||| |||| |||||||| Sbjct 2121790 AGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGGTACCATCAAACAAACTATAACTGA 2121732 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGAC 461 ||||||||||||||||||||||||| || | ||| | | ||||||| || Sbjct 2121731 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACAC 2121682 >seq527 Length=1699385 Score = 399 bits (442), Expect = 7e-109 Identities = 415/539 (77%), Gaps = 39/539 (7%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 1253499 CTCATTCCAATTACAGGGCCTCGAAAGAGACCTGTATTGTTATTTTTCGTCACTACCTCT 1253440 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1253439 CCGAGTCGGAAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 1253380 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| Sbjct 1253379 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGG 1253320 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC- 241 | ||| ||||||||||||||||||||||||| ||| ||| || | |||||| | | Sbjct 1253319 CGCCTAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAAGAGTCGTCGCCGCCGCG 1253260 Query 242 AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA--GGA--------------- 282 ||| | ||||| | | ||||| || ||||||| ||| Sbjct 1253259 GAGGGCGCGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGGGACCGGGGCGGGGACGG 1253200 Query 283 GCCCCGAAGGGCG--TTGGTTTTTTATCTAATAAATACA-----CCCCTTCCG------- 328 | ||| || || | |||||| |||| |||||| || |||| ||| Sbjct 1253199 GTCCCCAACCCCGGATGGGTTTTGGATCTGATAAATGCACGCGTCCCCGCCCGCGAGGGA 1253140 Query 329 AAGTCGG-GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTA 385 ||||| | | || ||||||||||||||| ||||| |||| |||||||| ||| | Sbjct 1253139 GGGTCGGCGCTCGTTTGCATGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTACCGGG 1253080 Query 386 AGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA 445 || | |||||| || ||||||||||||||||||||||||||||||||||||| | Sbjct 1253079 TGGAGCGATCAAAGGGACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGG 1253020 Query 446 TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | | ||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1253019 CCGTGTGTACTTAGACCTGCATGGCTTAATCTTTGAGACAAGCATATG-TTACTGGCAG 1252962 Score = 399 bits (442), Expect = 7e-109 Identities = 415/539 (77%), Gaps = 39/539 (7%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 1590465 CTCATTCCAATTACAGGGCCTCGAAAGAGACCTGTATTGTTATTTTTCGTCACTACCTCT 1590406 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1590405 CCGAGTCGGAAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 1590346 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| Sbjct 1590345 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGG 1590286 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC- 241 | ||| ||||||||||||||||||||||||| ||| ||| || | |||||| | | Sbjct 1590285 CGCCTAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAAGAGTCGTCGCCGCCGCG 1590226 Query 242 AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA--GGA--------------- 282 ||| | ||||| | | ||||| || ||||||| ||| Sbjct 1590225 GAGGGCGCGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGGGACCGGGGCGGGGACGG 1590166 Query 283 GCCCCGAAGGGCG--TTGGTTTTTTATCTAATAAATACA-----CCCCTTCCG------- 328 | ||| || || | |||||| |||| |||||| || |||| ||| Sbjct 1590165 GTCCCCAACCCCGGATGGGTTTTGGATCTGATAAATGCACGCGTCCCCGCCCGCGAGGGA 1590106 Query 329 AAGTCGG-GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTA 385 ||||| | | || ||||||||||||||| ||||| |||| |||||||| ||| | Sbjct 1590105 GGGTCGGCGCTCGTTTGCATGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTACCGGG 1590046 Query 386 AGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA 445 || | |||||| || ||||||||||||||||||||||||||||||||||||| | Sbjct 1590045 TGGAGCGATCAAAGGGACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGG 1589986 Query 446 TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | | ||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1589985 CCGTGTGTACTTAGACCTGCATGGCTTAATCTTTGAGACAAGCATATG-TTACTGGCAG 1589928 Score = 289 bits (320), Expect = 9e-76 Identities = 206/235 (88%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 1266940 CTCATTCCAATTACAGGGCCTCGAAAGAGACCTGTATTGTTATTTTTCGTCACTACCTCT 1266881 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1266880 CCGAGTCGGAAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 1266821 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| Sbjct 1266820 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGG 1266761 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 | ||| ||||||||||||||||||||||||| ||| ||| || | |||||| Sbjct 1266760 CGCCTAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAAGAGTCGTCGCCG 1266706 Score = 289 bits (320), Expect = 9e-76 Identities = 206/235 (88%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 1279337 CTCATTCCAATTACAGGGCCTCGAAAGAGACCTGTATTGTTATTTTTCGTCACTACCTCT 1279278 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1279277 CCGAGTCGGAAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 1279218 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| Sbjct 1279217 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGG 1279158 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 | ||| ||||||||||||||||||||||||| ||| ||| || | |||||| Sbjct 1279157 CGCCTAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAAGAGTCGTCGCCG 1279103 Score = 286 bits (316), Expect = 1e-74 Identities = 205/235 (87%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 1606111 CTCATTCCAATTACAGGGCCTCGAAAGAGACCTGTATTGTTATTTTTCGTCACTACCTCT 1606052 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1606051 CCGAGTCGGAAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 1605992 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||||||||||||||||| |||||||||||||||| | |||||| |||| Sbjct 1605991 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGATAGG 1605932 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 | ||| ||||||||||||||||||||||||| ||| ||| || | |||||| Sbjct 1605931 CGCCTAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAAGAGTCGTCGCCG 1605877 Score = 197 bits (218), Expect = 4e-48 Identities = 280/386 (73%), Gaps = 26/386 (7%) Strand=Plus/Minus Query 127 GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCAC 186 |||||||||||| ||||||||||| |||||||||||||||| | |||||||||||| | Sbjct 1154679 GCTCCCTCTCCGTAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGGCACC 1154620 Query 187 TATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG-GCTCAAGG 245 || ||||||| |||||||||||| |||| ||| || || | |||||| | | | Sbjct 1154619 TAAAGTACCATCAAAAGTTGATAGGACAGACATTCAAAAGAGTCGTCGCCGCGGTGGGTG 1154560 Query 246 CCATGCGATTCG--TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTT 303 | ||||| | | | ||||| || || |||| | | || | ||| || | Sbjct 1154559 C---GCGATCGGCATGAGGTTATCTAGAGTCCCCAAAGGGACCGG---GGCAG-GGACTG 1154507 Query 304 TTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTT-TTAGCATGTATTAGCTCTAGAA 362 | | || |||| | | || | | || ||||||||||||||| ||| Sbjct 1154506 GTCCCCAA--------CCCCGGATGGGTTTTGGATCTGTTTGCATGTATTAGCTCTGGAA 1154455 Query 363 TTACCACGGTTATCCATGTA----GTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 || |||| |||||||| ||| || || | |||||| || |||||||||||||| Sbjct 1154454 TTGCCACAGTTATCCAAGTACCTGGT--GGAGCGATCAAAGGGACCATAACTGATTTAAT 1154397 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 |||||||||||||||| |||||| | | | ||||||||| |||||||||||||||| Sbjct 1154396 GAGCCATTCGCAGTTTGACTGTACCGGCCGTGTGTACTTAGACCTGCATGGCTTAATCTT 1154337 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||| ||||||||| Sbjct 1154336 TGAGACAAGCATATG-TTACTGGCAG 1154312 Score = 190 bits (210), Expect = 6e-46 Identities = 280/387 (72%), Gaps = 27/387 (7%) Strand=Plus/Minus Query 127 GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCAC 186 |||||||||||| ||||||||||| |||||||||||||||| | |||||||||||| | Sbjct 1157038 GCTCCCTCTCCGTAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGGCACC 1156979 Query 187 TATCCTACCATCGAAA-GTTGATAGGGCAGAAATTTGAATGAACCATCGCCG-GCTCAAG 244 || ||||||| ||| ||||||||| |||| ||| || || | |||||| | | Sbjct 1156978 TAAAGTACCATCAAAAAGTTGATAGGACAGACATTCAAAAGAGTCGTCGCCGCGGTGGGT 1156919 Query 245 GCCATGCGATTCG--TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTT 302 || ||||| | | | ||||| || || |||| | | || | ||| || | Sbjct 1156918 GC---GCGATCGGCATGAGGTTATCTAGAGTCCCCAAAGGGACCGG---GGCAG-GGACT 1156866 Query 303 TTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTT-TTAGCATGTATTAGCTCTAGA 361 | | || |||| | | || | | || ||||||||||||||| || Sbjct 1156865 GGTCCCCAA--------CCCCGGATGGGTTTTGGATCTGTTTGCATGTATTAGCTCTGGA 1156814 Query 362 ATTACCACGGTTATCCATGTA----GTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 ||| |||| |||||||| ||| || || | |||||| || ||||||||||||| Sbjct 1156813 ATTGCCACAGTTATCCAAGTACCTGGT--GGAGCGATCAAAGGGACCATAACTGATTTAA 1156756 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 ||||||||||||||||| |||||| | | | ||||||||| ||||||||||||||| Sbjct 1156755 TGAGCCATTCGCAGTTTGACTGTACCGGCCGTGTGTACTTAGACCTGCATGGCTTAATCT 1156696 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||| ||||||||| Sbjct 1156695 TTGAGACAAGCATATG-TTACTGGCAG 1156670 Score = 167 bits (184), Expect = 7e-39 Identities = 138/166 (83%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAA 398 || ||||||||||||||| ||||| |||| |||||||| ||| | || | |||||| Sbjct 1266528 TTTGCATGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTACCGGGTGGAGCGATCAAA 1266469 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 || ||||||||||||||||||||||||||||||||||||| | | | |||||| Sbjct 1266468 GGGACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTA 1266409 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1266408 GACCTGCATGGCTTAATCTTTGAGACAAGCATATG-TTACTGGCAG 1266364 Score = 167 bits (184), Expect = 7e-39 Identities = 138/166 (83%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAA 398 || ||||||||||||||| ||||| |||| |||||||| ||| | || | |||||| Sbjct 1278758 TTTGCATGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTACCGGGTGGAGCGATCAAA 1278699 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 || ||||||||||||||||||||||||||||||||||||| | | | |||||| Sbjct 1278698 GGGACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTA 1278639 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1278638 GACCTGCATGGCTTAATCTTTGAGACAAGCATATG-TTACTGGCAG 1278594 >seq23 Length=18435467 Score = 390 bits (432), Expect = 3e-106 Identities = 315/373 (84%), Gaps = 12/373 (3%) Strand=Plus/Minus Query 111 GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGA 170 ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 13562184 GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCAC 13562125 Query 171 TACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACC 230 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 13562124 CACCATAGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGC 13562065 Query 231 ATCGCCGGCTC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCC 287 |||||||| | | |||| |||||| ||| |||||| |||||||| | | ||| | Sbjct 13562064 GTCGCCGGCACGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GTAGCAACGG 13562007 Query 288 GAAGGGC----GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTT 342 | || || || | ||||||||||||||| || ||||||| ||||||||||||| | Sbjct 13562006 GCAGAGCCCGTGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGT 13561947 Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAA 402 ||| ||||||||||||||||||| |||||||||| |||| |||||| |||||| ||| Sbjct 13561946 TGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGGTACCATCAAACAAA 13561888 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGAC 461 | ||||||||||||||||||||||||||||||||| || | ||| | | ||||||| || Sbjct 13561887 CTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACAC 13561828 Query 462 ATGCATGGCTTAA 474 ||||||||||||| Sbjct 13561827 ATGCATGGCTTAA 13561815 >seq319 Length=554131 Score = 333 bits (368), Expect = 8e-89 Identities = 350/454 (77%), Gaps = 26/454 (6%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 215617 CTCATTCCAATTACAGGGCCTCGAAAGAGACCTGTATTGTTATTTTTCGTCACTACCTCT 215558 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||| | |||||||||||| ||||||||| |||||||||||||||||||| |||| Sbjct 215557 CCGAGTCGGAAATGGGTAATTTGCACGCCTGCTGTCTTCCTTGGATGTGGTAGCCATTTC 215498 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| Sbjct 215497 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGG 215438 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC- 241 | ||| ||||||| ||||||||||||||||| ||| ||| || |||||| | | Sbjct 215437 CACCTAAAGTACCATCAAAAGTTGATAGGGCAGACATTCGAAAGAGTTGTCGCCGCCGCG 215378 Query 242 AAGGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 ||| | |||||| | | ||||| || ||||||| | ||| || | || Sbjct 215377 GAGGGCGCGCGATTGGCCCGAGGTTATCTAGAGTCACCAAAG------GAACGG-ATGGG 215325 Query 300 TTTTTTATCTAATAAATACA-----CCCCTTCCG-------AAGTC-GGGGTTTTTAGCA 346 |||| |||| |||||| || |||| ||| ||| | | | || ||| Sbjct 215324 TTTTGGATCTGATAAATGCACGCGTCCCCGCCCGCGAGGGAGGGTCAGCGCTCATTTGCA 215265 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACG 404 |||||||||||| ||||| |||| |||||||| ||| | || | |||||| || Sbjct 215264 TGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTACCGGGTGGAGCGATCAAAGGGACC 215205 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACT 438 |||||||||||||||||||||||||||||||||| Sbjct 215204 ATAACTGATTTAATGAGCCATTCGCAGTTTCACT 215171 Score = 102 bits (112), Expect = 2e-19 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAA 398 || ||||||||||||||| ||||| |||| |||||||| ||| | || | |||||| Sbjct 214666 TTTGCATGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTACCGGGTGGAGCGATCAAA 214607 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT 438 || |||||||||||||||||||||||||||||||||| Sbjct 214606 GGGACCATAACTGATTTAATGAGCCATTCGCAGTTTCACT 214567 >seq14 Length=18393167 Score = 127 bits (140), Expect = 6e-27 Identities = 171/236 (72%), Gaps = 14/236 (6%) Strand=Plus/Minus Query 4 CTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC- 61 ||||||||||||||| || | |||||| |||||| ||||| |||||| |||| | Sbjct 12933172 CTCATTCCAATTACAGAGCCTTGAAAGAGATCTGTATTGTTATTTTTTGTCAATACCGCA 12933113 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||||||| | | |||||||| | ||| ||||| |||||||||||||| | |||| Sbjct 12933112 CCCGTGTCAGAAATGGGTAATA--CCTACCTACTGCCCTCCTTGGATGTGGTTGTTGTTT 12933055 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||| ||||||||| ||| ||| ||| ||| ||| | |||||||| Sbjct 12933054 TTCAGGTTCCCTCTCCAGAACTGAATCCTGATTTCCCAT----------CACCATGGTTA 12933005 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 || ||| ||||||| |||||| |||| ||| ||| ||| ||| |||| ||| Sbjct 12933004 GCACCTAAAGTACCATCATTAGTTGACAGGGAAGACATTCGAAAGAATCATCACCG 12932949 >seq12 Length=12725232 Score = 114 bits (126), Expect = 4e-23 Identities = 87/103 (84%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 |||||||||||||||||||||||||| |||||||| |||| | | | | | |||| Sbjct 10854338 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAA 10854279 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 10854278 GGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 10854236 >seq7590 Length=1033330 Score = 105 bits (116), Expect = 2e-20 Identities = 114/148 (77%), Gaps = 5/148 (3%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT--AGTAAGGTACTATCAAATAA 401 ||||||||| | ||||||||| |||| ||||||||||| ||| || | |||||| | Sbjct 128564 GCATGTATTTGGTCTAGAATTGCCACAGTTATCCATGTACAGTGTGGAGCAATCAAAGGA 128505 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || |||| ||||||||||| | || | |||| | |||| || | | | ||||||| Sbjct 128504 ACCATAA-TGATTTAATGAAGCGTTTGTTGTTTTATTGTACTGACTAGCTGTGCTTAGAC 128446 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCA 489 || ||||||||||||||||||||||| Sbjct 128445 TTG--TGGCTTAATCTTTGAGACAAGCA 128420 >seq28 Length=22269040 Score = 87.8 bits (96), Expect = 5e-15 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 44 ATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCC--TGCTGCCTTC 101 |||| | ||||| ||||| | || | | | |||||||||||| | ||||| ||| Sbjct 14898895 ATTTTTCATCACTTCCTCCTCAAGTTGAAAATAGGTAATTTGCGCTCACATGCTGTGTTC 14898954 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 ||||||||| ||||| ||| ||| ||||||||| |||||| |||| ||||||| ||| Sbjct 14898955 CTTGGATGTACTAGCCATTTTTCAAGCTCCCTCTATGGAATCAAACCATAATTCCATGTT 14899014 Query 162 ACCCGTTGATACCATGGTAGGC 183 | | | |||||| ||||| Sbjct 14899015 ATACACGGTCACCATGTTAGGC 14899036 >seq314 Length=170590 Score = 82.4 bits (90), Expect = 2e-13 Identities = 104/142 (73%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 44 ATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCC--TGCTGCCTTC 101 |||| | ||||| ||||| | || | | | |||||||||||| | ||||| ||| Sbjct 73071 ATTTTTCATCACTTCCTCCTCAAGTTGAAAATAGGTAATTTGCGCTCACATGCTGTGTTC 73130 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 ||||||||| ||||| ||| ||| | ||||||| |||||| |||| ||||||| ||| Sbjct 73131 CTTGGATGTACTAGCCATTTTTCAAGTTCCCTCTATGGAATCAAACCATAATTCCATGTT 73190 Query 162 ACCCGTTGATACCATGGTAGGC 183 | | | |||||| ||||| Sbjct 73191 ATACACGGTCACCATGTTAGGC 73212 >seq40 Length=23490330 Score = 75.2 bits (82), Expect = 3e-11 Identities = 68/86 (79%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCAT 467 ||||||||||||||||||| ||| |||| |||| || || | | || || ||||| Sbjct 3528402 ACTGATTTAATGAGCCATTTACAGCTTCAGTGTACTGACTGTAAACATTTGCACCTGCAT 3528343 Query 468 GGCTTAATCTTTGAGACAAGCATATG 493 |||||||||||||||| || ||||| Sbjct 3528342 GGCTTAATCTTTGAGAAAAAAATATG 3528317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510258354688