Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq7 150 3e-34 seq5 150 3e-34 seq4 150 3e-34 seq1094 147 3e-33 seq534 134 2e-29 >seq7 Length=74282399 Score = 150 bits (166), Expect = 3e-34 Identities = 177/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||||||||| |||||| | Sbjct 4787 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCTGCGCTTACTGGGAATT-C 4730 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | |||| || ||| | |||| ||||||| ||||| | || Sbjct 4729 CTCGTTGATGGGAAACAGTTTCAAGCCCCAGTCCCAATCACGAGCGGGGTTCAACGGGTT 4670 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| | || |||||| || ||| |||||||||| Sbjct 4669 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 4610 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||| | || |||||| Sbjct 4609 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTCGCGTGGC 4557 >seq5 Length=72500376 Score = 150 bits (166), Expect = 3e-34 Identities = 177/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||||||||| |||||| | Sbjct 825095 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCTGCGCTTACTGGGAATT-C 825152 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | |||| || ||| | |||| ||||||| ||||| | || Sbjct 825153 CTCGTTGATGGGAAACAGTTTCAAGCCCCAGTCCCAATCACGAGCGGGGTTCAACGGGTT 825212 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| | || |||||| || ||| |||||||||| Sbjct 825213 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 825272 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||| | || |||||| Sbjct 825273 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTCGCGTGGC 825325 >seq4 Length=78093715 Score = 150 bits (166), Expect = 3e-34 Identities = 177/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| | Sbjct 55728261 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 55728318 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| ||| || | ||||||| | |||| ||||||| |||||| | || Sbjct 55728319 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 55728378 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| | || |||||| || ||| |||||||||| Sbjct 55728379 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 55728438 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 55728439 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 55728491 Score = 150 bits (166), Expect = 3e-34 Identities = 177/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| | Sbjct 55778977 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 55778920 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| ||| || | ||||||| | |||| ||||||| |||||| | || Sbjct 55778919 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 55778860 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| | || |||||| || ||| |||||||||| Sbjct 55778859 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 55778800 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 55778799 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 55778747 Score = 150 bits (166), Expect = 3e-34 Identities = 177/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| | Sbjct 55795174 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 55795117 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| ||| || | ||||||| | |||| ||||||| |||||| | || Sbjct 55795116 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 55795057 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| | || |||||| || ||| |||||||||| Sbjct 55795056 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 55794997 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 55794996 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 55794944 Score = 150 bits (166), Expect = 3e-34 Identities = 177/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| | Sbjct 55810734 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 55810677 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| ||| || | ||||||| | |||| ||||||| |||||| | || Sbjct 55810676 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 55810617 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| | || |||||| || ||| |||||||||| Sbjct 55810616 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 55810557 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 55810556 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 55810504 Score = 150 bits (166), Expect = 3e-34 Identities = 177/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| | Sbjct 68567935 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 68567992 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| ||| || | ||||||| | |||| ||||||| |||||| | || Sbjct 68567993 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 68568052 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| | || |||||| || ||| |||||||||| Sbjct 68568053 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 68568112 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 68568113 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 68568165 Score = 147 bits (162), Expect = 3e-33 Identities = 176/234 (75%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| |||| |||||| ||||||||| |||||| | Sbjct 77561381 GTACAAAGGGCAGGGACTTAATCAACGCAAGCT-GATGACCTGCGCTTACTGGGAATT-C 77561438 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | || | || |||| | ||||||||||| ||||| | || Sbjct 77561439 CTCGTTCTCGGGAAATAGTTTCAATCCCCGGTCCCCATCACGGGCGGGGTTCAACGGGTT 77561498 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||||||| ||| | || |||||| || ||| |||||||||| Sbjct 77561499 ACCCGCGCCTGTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 77561558 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 77561559 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 77561611 Score = 89.7 bits (98), Expect = 8e-16 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||||||| ||||||||| ||| | || |||||| || ||| ||||||||| Sbjct 77549946 TTACCCGCGCCTGTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTG 77550005 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 77550006 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 77550060 >seq1094 Length=204803 Score = 147 bits (162), Expect = 3e-33 Identities = 176/234 (75%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| |||| |||||| ||||||||| |||||| | Sbjct 11500 GTACAAAGGGCAGGGACTTAATCAACGCAAGCT-GATGACCTGCGCTTACTGGGAATT-C 11557 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | || | || |||| | ||||||||||| ||||| | || Sbjct 11558 CTCGTTCTCGGGAAATAGTTTCAATCCCCGGTCCCCATCACGGGCGGGGTTCAACGGGTT 11617 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||||||| ||| | || |||||| || ||| |||||||||| Sbjct 11618 ACCCGCGCCTGTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 11677 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 11678 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 11730 Score = 89.7 bits (98), Expect = 8e-16 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||||||| ||||||||| ||| | || |||||| || ||| ||||||||| Sbjct 65 TTACCCGCGCCTGTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTG 124 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | |||| | |||||||||||||||||||||||||||||| |||| || |||||| Sbjct 125 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 179 >seq534 Length=14336 Score = 134 bits (148), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| |||||||||| |||| |||||| ||||||||| |||||| | Sbjct 7801 GTACAAAGGGCAGGGACTTAGTCAACGCAAGCT-GATGACCTGCGCTTACTGGGAATT-C 7858 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119 |||||| | |||| || |||| | |||||| |||| ||||| | | Sbjct 7859 CTCGTTCTCGGGAAACAGTTTCAATCCCCGGTCCCCAGCACGGACGGGGTTCAACGGGTC 7918 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| |||| ||||| ||| | || |||||| || |||||| ||||||| Sbjct 7919 ACCCACACCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTAGCTCGCGTGCA 7978 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | |||||||||||||||||||||||| |||||| Sbjct 7979 GCCCCGGACATCTAAGGGCATCACAGACCTGCTATTGC 8016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751985990945