Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq7 150 3e-34
seq5 150 3e-34
seq4 150 3e-34
seq1094 147 3e-33
seq534 134 2e-29
>seq7
Length=74282399
Score = 150 bits (166), Expect = 3e-34
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||||||||| |||||| |
Sbjct 4787 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCTGCGCTTACTGGGAATT-C 4730
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||||| | |||| || ||| | |||| ||||||| ||||| | ||
Sbjct 4729 CTCGTTGATGGGAAACAGTTTCAAGCCCCAGTCCCAATCACGAGCGGGGTTCAACGGGTT 4670
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| ||| | || |||||| || ||| ||||||||||
Sbjct 4669 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 4610
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||| | || ||||||
Sbjct 4609 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTCGCGTGGC 4557
>seq5
Length=72500376
Score = 150 bits (166), Expect = 3e-34
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||||||||| |||||| |
Sbjct 825095 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCTGCGCTTACTGGGAATT-C 825152
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||||| | |||| || ||| | |||| ||||||| ||||| | ||
Sbjct 825153 CTCGTTGATGGGAAACAGTTTCAAGCCCCAGTCCCAATCACGAGCGGGGTTCAACGGGTT 825212
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| ||| | || |||||| || ||| ||||||||||
Sbjct 825213 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 825272
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||| | || ||||||
Sbjct 825273 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTCGCGTGGC 825325
>seq4
Length=78093715
Score = 150 bits (166), Expect = 3e-34
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| |
Sbjct 55728261 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 55728318
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| ||| || | ||||||| | |||| ||||||| |||||| | ||
Sbjct 55728319 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 55728378
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| ||| | || |||||| || ||| ||||||||||
Sbjct 55728379 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 55728438
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 55728439 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 55728491
Score = 150 bits (166), Expect = 3e-34
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| |
Sbjct 55778977 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 55778920
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| ||| || | ||||||| | |||| ||||||| |||||| | ||
Sbjct 55778919 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 55778860
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| ||| | || |||||| || ||| ||||||||||
Sbjct 55778859 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 55778800
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 55778799 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 55778747
Score = 150 bits (166), Expect = 3e-34
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| |
Sbjct 55795174 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 55795117
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| ||| || | ||||||| | |||| ||||||| |||||| | ||
Sbjct 55795116 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 55795057
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| ||| | || |||||| || ||| ||||||||||
Sbjct 55795056 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 55794997
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 55794996 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 55794944
Score = 150 bits (166), Expect = 3e-34
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| |
Sbjct 55810734 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 55810677
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| ||| || | ||||||| | |||| ||||||| |||||| | ||
Sbjct 55810676 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 55810617
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| ||| | || |||||| || ||| ||||||||||
Sbjct 55810616 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 55810557
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 55810556 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 55810504
Score = 150 bits (166), Expect = 3e-34
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||| ||| ||| |||||| ||||||||| |||||| |
Sbjct 68567935 GTACAAAGGGCAGGGACTTAATCAGCGCTGGCT-GATGACCAGCGCTTACTGGGAATT-C 68567992
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| ||| || | ||||||| | |||| ||||||| |||||| | ||
Sbjct 68567993 CTCGTTCAAGGGAAATAGTTGCAATCCCCGGTCCCAATCACGAGCGGGTTTCAACGGGTT 68568052
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| ||| | || |||||| || ||| ||||||||||
Sbjct 68568053 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 68568112
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 68568113 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 68568165
Score = 147 bits (162), Expect = 3e-33
Identities = 176/234 (75%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| |||| |||||| ||||||||| |||||| |
Sbjct 77561381 GTACAAAGGGCAGGGACTTAATCAACGCAAGCT-GATGACCTGCGCTTACTGGGAATT-C 77561438
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | || | || |||| | ||||||||||| ||||| | ||
Sbjct 77561439 CTCGTTCTCGGGAAATAGTTTCAATCCCCGGTCCCCATCACGGGCGGGGTTCAACGGGTT 77561498
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||||||||| ||| | || |||||| || ||| ||||||||||
Sbjct 77561499 ACCCGCGCCTGTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 77561558
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 77561559 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 77561611
Score = 89.7 bits (98), Expect = 8e-16
Identities = 90/116 (78%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
||||||| ||||||||| ||| | || |||||| || ||| |||||||||
Sbjct 77549946 TTACCCGCGCCTGTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTG 77550005
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
| |||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 77550006 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 77550060
>seq1094
Length=204803
Score = 147 bits (162), Expect = 3e-33
Identities = 176/234 (75%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| |||| |||||| ||||||||| |||||| |
Sbjct 11500 GTACAAAGGGCAGGGACTTAATCAACGCAAGCT-GATGACCTGCGCTTACTGGGAATT-C 11557
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | || | || |||| | ||||||||||| ||||| | ||
Sbjct 11558 CTCGTTCTCGGGAAATAGTTTCAATCCCCGGTCCCCATCACGGGCGGGGTTCAACGGGTT 11617
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||||||||| ||| | || |||||| || ||| ||||||||||
Sbjct 11618 ACCCGCGCCTGTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTGCA 11677
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 11678 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 11730
Score = 89.7 bits (98), Expect = 8e-16
Identities = 90/116 (78%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
||||||| ||||||||| ||| | || |||||| || ||| |||||||||
Sbjct 65 TTACCCGCGCCTGTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTGGCGCGCGTG 124
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
| |||| | |||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 125 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAGTCTCGCGTGGC 179
>seq534
Length=14336
Score = 134 bits (148), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| |||||||||| |||| |||||| ||||||||| |||||| |
Sbjct 7801 GTACAAAGGGCAGGGACTTAGTCAACGCAAGCT-GATGACCTGCGCTTACTGGGAATT-C 7858
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119
|||||| | |||| || |||| | |||||| |||| ||||| | |
Sbjct 7859 CTCGTTCTCGGGAAACAGTTTCAATCCCCGGTCCCCAGCACGGACGGGGTTCAACGGGTC 7918
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| |||| ||||| ||| | || |||||| || |||||| |||||||
Sbjct 7919 ACCCACACCTCTCGGCGCAGGGTAGGCACACGTTGATCCGCCCATTGTAGCTCGCGTGCA 7978
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||| | |||||||||||||||||||||||| ||||||
Sbjct 7979 GCCCCGGACATCTAAGGGCATCACAGACCTGCTATTGC 8016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751985990945
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