Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq4 73.4 1e-10 >seq4 Length=78093715 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || ||| |||| | || | ||||||||| |||||||||||||| Sbjct 55780535 ACGGTTTCACGCCCTGTTTAACTCTCAA-TCTGAAGTTCTTTTCAACTTTCCCTCACGGT 55780477 Query 330 ACTAGTTCACTATCGGTCA-GT-CAGTAGTATTTAGCCTTGGA 370 ||| |||| |||||||||| || | | |||||||||||| || Sbjct 55780476 ACTTGTTCGCTATCGGTCACGTGCCG--GTATTTAGCCTTAGA 55780436 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || ||| |||| | || | ||||||||| |||||||||||||| Sbjct 55812291 ACGGTTTCACGCCCTGTTTAACTCTCAA-TCTGAAGTTCTTTTCAACTTTCCCTCACGGT 55812233 Query 330 ACTAGTTCACTATCGGTCA-GT-CAGTAGTATTTAGCCTTGGA 370 ||| |||| |||||||||| || | | |||||||||||| || Sbjct 55812232 ACTTGTTCGCTATCGGTCACGTGCCG--GTATTTAGCCTTAGA 55812192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241576124032