Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq14 116 6e-24 seq297 78.8 1e-12 >seq14 Length=34043612 Score = 116 bits (128), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 26/234 (11%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||| ||| Sbjct 24840766 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAA-TTC 24840823 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119 |||||| | | || ||||||||| | ||||| ||||||| || || | || Sbjct 24840824 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCACGGGGTT 24840883 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| || | ||| ||| ||||||| |||||||||| Sbjct 24840884 ACCC--AC------------------GCCTC--TGATCCGCTCAGTGTGGCGCGCGTGCA 24840921 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | || | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 24840922 GTCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 24840974 >seq297 Length=31496 Score = 78.8 bits (86), Expect = 1e-12 Identities = 78/96 (81%), Gaps = 4/96 (4%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 ||||||| ||| |||||| |||| | ||| |||||||||||||||||||||||||| ||| Sbjct 26779 TCAGTGTGGCGTGCGTGCAGCCCCGGACA-CTAAGGGCATCACAGACCTGTTATTG-CTC 26836 Query 221 AAACTTCCGTGGCCTAAAAGGC-CATCTCCCTCGAA 255 || || |||| ||||| | | | | |||||| || Sbjct 26837 AATCTCGTGTGG-CTAAACGCCACTTGTCCCTCTAA 26871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751992576585