Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq14 203 5e-50 seq297 93.3 7e-17 seq1 86.0 1e-14 >seq14 Length=34043612 Score = 203 bits (224), Expect = 5e-50 Identities = 197/250 (79%), Gaps = 19/250 (8%) Strand=Plus/Plus Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70 |||| ||||||| |||||||||| | || | ||||||||||||||||||||||||||||| Sbjct 24840898 TCCGCTCAGTGTGGCGCGCGTGCAGTCCCGGACATCTAAGGGCATCACAGACCTGTTATT 24840957 Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCAT 130 || |||| || | |||||| | |||| | |||||||||||||| || | | Sbjct 24840958 GC-TCAATCT-CGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGACCGCGT----T 24841011 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | | |||||| | |||||||||||||||| ||||||||||||||| Sbjct 24841012 A----------CGAGTTAGCAAGCCGGAGTCTCGTTCGTTATCGAAATTAACCAGACAAA 24841061 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA--AGAGCTA 248 || ||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| | Sbjct 24841062 TCGCTCCACCAACTAAGAACGGCCATGCACAACCACCCACAGAATTAAGAAAGAGAGCGA 24841121 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 24841122 TCAATCTGTC 24841131 >seq297 Length=31496 Score = 93.3 bits (102), Expect = 7e-17 Identities = 83/100 (83%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||| ||| |||||| |||| | ||| |||||||||||||||||||||||||| ||| Sbjct 26779 TCAGTGTGGCGTGCGTGCAGCCCCGGACA-CTAAGGGCATCACAGACCTGTTATTG-CTC 26836 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 || | || ||||| | |||| | |||||||||||||| Sbjct 26837 AATC-TCGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAG 26875 >seq1 Length=40371802 Score = 86.0 bits (94), Expect = 1e-14 Identities = 78/96 (81%), Gaps = 8/96 (8%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||| || |||||| |||||| |||| ||||| ||||||||||||||||| |||||| Sbjct 39580619 GTCTCATTTGTTATCAGAATTAGTCAGATAAATCGCTCCACCAACTAAGAACAGCCATG- 39580677 Query 219 ACCACCACCCATAGAATCA-AGAAAGAGCTATCAAT 253 |||||| ||||||| ||||| || ||||||| Sbjct 39580678 -----CACCCACAGAATCACAGAAA-AGTTATCAAT 39580707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796792134339