Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq7 248 1e-63 seq5 226 5e-57 seq813 206 5e-51 seq645 161 2e-37 seq21 141 2e-31 seq4 125 1e-26 seq13 107 3e-21 seq20 73.4 7e-11 seq19 73.4 7e-11 >seq7 Length=46052510 Score = 248 bits (274), Expect = 1e-63 Identities = 163/180 (91%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 51 ACCTGTCTCATGACGGTC----TAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 |||||||||| ||| ||| | |||||||||| |||||||||||||||||||||||| Sbjct 17355030 ACCTGTCTCACGACAGTCAGGTTCCACCCAGCTCAGGTTCCCTATTAGTGGGTGAACAAT 17355089 Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 17355090 CCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAA 17355149 Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 17355150 AGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 17355209 >seq5 Length=33107657 Score = 226 bits (250), Expect = 5e-57 Identities = 151/168 (90%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 46 AACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAA 105 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 16948726 AACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTATTGGGTGAACAA 16948667 Query 106 TCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAA 165 ||||| |||| |||||||||||| ||||||||||| ||||||||||||||||| Sbjct 16948666 TCCAATGCTTGGTGAATTCTGCTTCACAATGATAGGAAG----GACATCGAAGGATCAAA 16948611 Query 166 AAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 |||| | |||||||||||| |||||| ||||||||||||||||||||| Sbjct 16948610 AAGCGATGTCGCTATGAACACTTGGCCGCCACAAGCCAGTTATCCCTG 16948563 >seq813 Length=748108 Score = 206 bits (228), Expect = 5e-51 Identities = 217/292 (74%), Gaps = 30/292 (10%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || |||| |||||||||||||||||||||||| Sbjct 149232 TACTGAGCAGGATTACTATTGCAACAACACATCATAAGTAGGGTAAAACTAACCTGTCTC 149291 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 149292 ACGACGGTCTATACCCAGCTCACATTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 149351 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| ||||| ||||||||||||||||||||| Sbjct 149352 AATTCTGCTTCACAATGATTGGAAGAGCCGACATCGAAGGA------------------- 149392 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || ||||||| ||||||||||||||||||||||||||| || ||| ||| Sbjct 149393 ----------GCCGCCACAAACCAGTTATCCCTGTGGTAACTTTTCTGACAACTCCAGCT 149442 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291 | ||| | | | |||||||| ||||| |||||| ||| ||||| Sbjct 149443 TAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCTGCTTTCACGGTCTGTAT 149494 >seq645 Length=529590 Score = 161 bits (178), Expect = 2e-37 Identities = 152/195 (78%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 |||||||||||||||| |||||||||||| || ||||||||||||||||| ||||| Sbjct 64258 GAACAATCCAACGCTTGGTGAATTCTGCTTCACAATAATAGGAAGAGCCGACATTGAAGG 64199 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 ||||||||| | |||||| |||||||||||| ||||||||||| ||||||| Sbjct 64198 ATCAAAAAGTGATGTCGCTGTGAACGCTTGGCCGCCACAAGCCA---------GTGGTAA 64148 Query 220 CTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTT 279 |||||||| |||||| || | ||| | | | |||||||| ||||| |||| Sbjct 64147 CTTTTCTGACACCTCCTGCTTAAAACCCAAATAGTCAGAAGGATCGTGAGGCCCTGCTTT 64088 Query 280 CATGGTTTGTATTCA 294 |||||| |||||||| Sbjct 64087 CATGGTCTGTATTCA 64073 >seq21 Length=24691485 Score = 141 bits (156), Expect = 2e-31 Identities = 110/130 (85%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || |||||||||||||||||| |||||||||| Sbjct 3079 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACMAACCTGTCTC 3020 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 3019 ACGACGGTCTAACCCCAGCTCACGTTCCCTATTAGTGGTTGAACAATCCAACGCTTGGTG 2960 Query 120 AATTCTGCTT 129 |||| | ||| Sbjct 2959 AATTTTTCTT 2950 >seq4 Length=26943076 Score = 125 bits (138), Expect = 1e-26 Identities = 113/139 (81%), Gaps = 10/139 (7%) Strand=Plus/Plus Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 9073828 GATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTACTA 9073887 Query 219 ACTTTTCTGGCACCT-CT--AGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275 ||||||||| ||||| || | ||| ||| || || |||||| | ||||| | Sbjct 9073888 ACTTTTCTGACACCTGCTTAAACCTAAAAAGTC-AG------AAGGATTGTGAGGCCCCG 9073940 Query 276 CTTTCATGGTTTGTATTCA 294 ||||||||| |||||||| Sbjct 9073941 GTTTCATGGTCTGTATTCA 9073959 >seq13 Length=36369518 Score = 107 bits (118), Expect = 3e-21 Identities = 93/115 (81%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 49 TAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC 108 ||||||||||| || ||||||||| | |||||| |||||||||||||| |||| ||| Sbjct 3723737 TAACCTGTCTCCAGAGGGTCTAAACTCTGCTCACCTTCCCTATTAGTGGATGAAAAATTA 3723678 Query 109 AACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 ||| ||| |||||||||||| ||| | ||||||||||||| |||||||| Sbjct 3723677 AACACTTGGTGAATTCTGCTTCACAATGGTTGGAAGAGCCGACA---AAGGATCA 3723626 >seq20 Length=42629069 Score = 73.4 bits (80), Expect = 7e-11 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || |||||||||||||||||| |||||||||| Sbjct 17919706 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACGAACCTGTCTC 17919647 Query 60 ATGACGGTCTAA 71 |||||||||||| Sbjct 17919646 ATGACGGTCTAA 17919635 >seq19 Length=39684913 Score = 73.4 bits (80), Expect = 7e-11 Identities = 62/75 (83%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 35420190 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 35420249 Query 60 ATGACGGTCTAAACC 74 | |||||||||| || Sbjct 35420250 ACGACGGTCTAATCC 35420264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854391293664