Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq645 396 9e-108 seq11 178 4e-42 >seq645 Length=529590 Score = 396 bits (438), Expect = 9e-108 Identities = 271/303 (89%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTCCCACTTA 246 ||||| ||||||||||||| ||||||||||||||| ||| |||| || |||||||||| Sbjct 63934 TAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAGAC--CTCCCACTTA 63877 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 |||||||||||||| ||| |||||| | | |||||||||||||||||||||||||||| Sbjct 63876 TTCTACACCTCTCATGTCTATTCACAGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTC 63817 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| || Sbjct 63816 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTATCACTAGATAGTAGGTA 63757 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct 63756 GGGACAGTGGGAATCTCGTTCATCCATTCATGCGCATCACTAATTAGATGAAAAGGCATT 63697 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 || ||||||| ||||||||||| ||| | |||||||||||| |||||| |||||||| | Sbjct 63696 TGTCTACCTTCAGAGAGTCATATTTATTTCCGCCGTTTACCTGCGCTTCATTGAATTTGT 63637 Query 487 TCA 489 ||| Sbjct 63636 TCA 63634 Score = 84.2 bits (92), Expect = 7e-14 Identities = 81/103 (79%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||| Sbjct 64040 CTTGTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCACCTTAGGACACCTGCGTTATC 63981 Query 67 GTTTAACAGATGTGCCGCCCCA--GCCAAACTCCCCACCTGAC 107 |||| |||| ||| | ||| || ||| |||||| ||| || Sbjct 63980 GTTTGACAGGTGTACTGCCTCAGGGCCCGCCTCCCCGCCTCAC 63938 >seq11 Length=44859740 Score = 178 bits (196), Expect = 4e-42 Identities = 121/136 (89%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 444 || |||||||||||| |||||||||| |||||||||||||||||| ||||||||| || Sbjct 19930544 TTCATCCATTCATGCATGTCACTAATTCTATGACGAGGCATTTGGCTGCCTTAAGAGTGT 19930485 Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||| |||| Sbjct 19930484 CATAGTTACTCTCGCCGTTTACCCGTACTTCATTGAATTTCTTCACTTTGATATTTAGAG 19930425 Query 505 CACTGGGCAGAAATCA 520 ||||||| |||||||| Sbjct 19930424 CACTGGGAAGAAATCA 19930409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635183337312