Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4 199 1e-48 seq20 163 9e-38 seq297 147 7e-33 seq16 138 3e-30 seq645 123 8e-26 seq15 82.4 2e-13 >seq4 Length=26943076 Score = 199 bits (220), Expect = 1e-48 Identities = 144/165 (87%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 395469 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 395528 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 || ||| ||||||| ||||||||||||| ||||||| |||||||||||||||| ||| | Sbjct 395529 TCACCGAGTCGGGAGTGGGTAATTTGCGTCCCTGCTGTCTTCCTTGGATGTGGTGGCCAT 395588 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164 ||||||||||||||||| ||||||||||||| |||||| |||||| Sbjct 395589 TTCTCAGGCTCCCTCTCTGGAATCGAACCCTGATTCCCTGTTACC 395633 >seq20 Length=42629069 Score = 163 bits (180), Expect = 9e-38 Identities = 126/147 (86%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || ||||||||||||||| | || | |||||| ||||||| ||||| ||||||||||| Sbjct 21563622 GTTCTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTT-TTGTCACTACC 21563680 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| |||||| |||||||||||| |||||||| | |||||||||| ||||||| | Sbjct 21563681 TCCCCGAGTCGGGTGTGGGTAATTTGCACGCCTGCTATCATCCTTGGATGGGGTAGCCAT 21563740 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAA 146 ||||||||||||||||| |||||| || Sbjct 21563741 TTCTCAGGCTCCCTCTCTGGAATCAAA 21563767 >seq297 Length=31496 Score = 147 bits (162), Expect = 7e-33 Identities = 148/186 (80%), Gaps = 6/186 (3%) Strand=Plus/Plus Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG-TCGGGGTTT-TTAGCATGTATTA 353 ||||||| |||||||||| ||| | | || |||| || | | | || |||||||||| Sbjct 15379 TGGTTTTGGGTCTAATAAATGCACGCATCCCCGAAGGTCAGTGCTCGTTTGCATGTATTA 15438 Query 354 GCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACTG 411 |||||||||||||||| |||||||| ||| || || | |||||| ||| ||||||| Sbjct 15439 GCTCTAGAATTACCACAGTTATCCAAGTAACGTT-GGAGCGATCAAAGGAACCATAACTG 15497 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 |||||||||||||||||||||||||||||| | | |||||| || ||||||||| Sbjct 15498 ATTTAATGAGCCATTCGCAGTTTCACTGTACCAGCCGTGTGTACTTACACTTGCATGGCT 15557 Query 472 TAATCT 477 |||||| Sbjct 15558 TAATCT 15563 >seq16 Length=32734063 Score = 138 bits (152), Expect = 3e-30 Identities = 133/168 (79%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA-GGTACTATCA 396 || || |||||||||||||||| |||| || | ||| ||| ||| || || | |||| Sbjct 22443537 TTGTTGGCATGTATTAGCTCTACAATTGCCGCCATTAACCAAGTAACAATGGGGCGATCA 22443478 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| ||||||||||||||||||||||||||||||||||||| | | | |||| Sbjct 22443477 AAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCGGTGTCTACT 22443418 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || || || ||||||||||| || ||||||||||| || ||||||| Sbjct 22443417 TACACTTGTATGGCTTAATCACTGTAACAAGCATATG-CTGCTGGCAG 22443371 >seq645 Length=529590 Score = 123 bits (136), Expect = 8e-26 Identities = 120/149 (81%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG-TCGGGGTTT-TTAGCATGTATTA 353 ||||||| |||||||||| ||| | | || |||| || | | | || |||||||||| Sbjct 59150 TGGTTTTGGGTCTAATAAATGCACGCATCCCCGAAGGTCAGTGCTCGTTTGCATGTATTA 59091 Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-CTATCAAATAAACGATAACTGA 412 |||||||||||||||| ||||| || ||| | | | | |||||| ||| |||||||| Sbjct 59090 GCTCTAGAATTACCACAGTTATTCAAGTAATGTTGGAGCAATCAAAGGAACCATAACTGA 59031 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTA 441 ||||||||||||||||||||||||| ||| Sbjct 59030 TTTAATGAGCCATTCGCAGTTTCACAGTA 59002 >seq15 Length=32003092 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/84 (82%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110 ||||||||||||||| ||||| ||| ||| || |||| |||||||||||||||| Sbjct 10112421 GTCACTACCTCCCCGCGTCGGAGCTGG---ATTGGCATGCCTTCTGCCTTCCTTGGATGG 10112365 Query 111 GGTAGCCGTTTCTCAGGCTCCCTC 134 ||| |||||||||||| |||| || Sbjct 10112364 GGTCGCCGTTTCTCAGCCTCCGTC 10112341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510384609024