Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7 123 2e-23 seq18 113 4e-20 seq10 86.0 5e-12 >seq7 Length=46052510 Score = 123 bits (136), Expect = 2e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| ||||| || || || || |||||| | ||||||||||| ||||| || Sbjct 17698924 GGTGTACTCTACAATCTCAGTACAGAGGTTACTGGACTTTATGGTGCCCAGGTTCTGCTG 17698865 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| | |||||| |||||||| || | |||||| || || ||||||||| || Sbjct 17698864 GTTGCTCTTCCTATTGCAGGCATCCTTATAAAGCATGTAAGGGGTTCCGGTCTCAGTCTG 17698805 Query 66169 GGACTCAATGATGGCGTGCCA 66189 ||||||||| ||||||||||| Sbjct 17698804 GGACTCAATAATGGCGTGCCA 17698784 >seq18 Length=26030928 Score = 113 bits (124), Expect = 4e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| | |||||||| || ||| | || ||| | || ||||| |||||||||| Sbjct 19432405 TGGAGCGCTTCACTCAGGAGGTCCAGGTGACTGAAGCGAGATGCTTCTATGGCTTCCAGA 19432346 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 |||| ||||||||| |||| || ||||||||||| | ||||| ||||| ||||||| Sbjct 19432345 TTGCAATGGAGAATATCCATTCAGAGATGTACAGCCTGCTCATTGATACCTACATCA 19432289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 |||||||| | | |||||||| || || || || | ||||||||| |||| | ||| Sbjct 19432865 GAACCCCTCCTTAAGGAGAATCCACGGCGCTTTGTCATTTTCCCCATCAAGTACCATGAT 19432806 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || |||| |||||||| ||||| ||||| ||||||||||||| |||||||| Sbjct 19432805 ATATGGCAGATGTACAAGAAGGCCGAAGCGTCCTTCTGGACGGCTGAGGAGGT 19432753 >seq10 Length=26897606 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| | | ||||| || | |||||| || |||||||| ||| ||||| Sbjct 26345774 CAGGAGGTGCAGCTTCCAGAGGCCCGCTTTTTCTATGGGTTCCAGATACTCATTGAGAAC 26345833 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||||| ||||||||||| | |||||| | || |||||||| || Sbjct 26345834 ATCCACTCTGAGATGTACAGCCTGCTCATCAACACCTACATCAGAGA 26345880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563062578160