Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq746 159 6e-37 >seq746 Length=116330 Score = 159 bits (176), Expect = 6e-37 Identities = 207/281 (74%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| || || | | | | | |||||||||||||||||||||||| Sbjct 86539 ATGCTCTTAGCTGAGTGTCTCGCGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 86598 Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| | || |||||| ||| |||||||| ||||||||| | |||| Sbjct 86599 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 86657 Query 156 TCTATTTTGTTGGTT----TCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTG 211 |||||||||| |||| || | || | | |||||||| ||||| | |||||| Sbjct 86658 TCTATTTTGTGGGTTTTTCTCCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGGCA 86717 Query 212 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271 | ||||| | |||| ||||||||||||| ||||| || | |||||| Sbjct 86718 TTCGTATTGTGCCGCTAGAGATGAAATTCTTGGACCGGCGCAAGACGGACGAAAGCGAAA 86777 Query 272 GCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || || ||||| |||||||||||||||| |||||||||| Sbjct 86778 GCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 86817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915106832640