Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1748 125 3e-27 seq1181 125 3e-27 >seq1748 Length=24626 Score = 125 bits (138), Expect = 3e-27 Identities = 89/102 (87%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 18506 GGAAAAGAAACTATCCAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 18447 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| || | | ||||| |||| |||||| ||| Sbjct 18446 CCGAATCCCCGTCCGACTGGCGGGCGTGGGAAATGTGGTGTA 18405 >seq1181 Length=47698 Score = 125 bits (138), Expect = 3e-27 Identities = 86/97 (89%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 7316 GGAAAAGAAACTAACCAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 7257 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTG 97 ||||||||||| || | | ||||| |||| ||||| Sbjct 7256 CCGAATCCCCGTCCGACTGGCGGGCGTGGGAAATGTG 7220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230378011200