Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq3694 82.4 1e-13 >seq3694 Length=9729 Score = 82.4 bits (90), Expect = 1e-13 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 173 CTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACC 232 ||||||||||||| ||| |||||||||| ||| || |||||||| ||||| ||||| Sbjct 3194 CTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTATTAATGGGTGAACAATCCAACG 3253 Query 233 CT-TGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || ||||| || | || ||| | ||| || |||||||||||| Sbjct 3254 CTATGGGA-CTTTTGCATCCCAATGATAGGAAGAGCCGACATCG 3296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780722998480