Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq9865 113 2e-19 >seq9865 Length=3154023 Score = 113 bits (124), Expect = 2e-19 Identities = 122/159 (77%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| | |||| || ||||||||| |||||| || | |||||||| | || |||||| Sbjct 73661 CTCGATGAGCATGCCGATGGTCATGCGGGACGGGAAGCCGTGCGGGTTGAAGAGGATGTC 73602 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103 |||| | |||| | || |||||||||||||||| | | ||| ||||| | | Sbjct 73601 CGGCGCCATGCCGCTCTCGGTGAAGGGCATGTCCTC--CGCCGGCCA-CAGGCGGCTCAG 73545 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 || |||||||||||||||||||||| ||||||||| || Sbjct 73544 GATGCCCTTCTGGCCGTGGCGGCTGGCGAACTTGTCGCC 73506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084460652783640