Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq98693 168 1e-39 seq125516 161 1e-37 seq385084 141 1e-31 seq137541 105 1e-20 seq123873 98.7 1e-18 seq363986 87.8 3e-15 >seq98693 Length=350 Score = 168 bits (186), Expect = 1e-39 Identities = 181/234 (77%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||| |||||||| |||| || ||||||| |||||| | Sbjct 296 GTACAAAGGGCAGGGACTTAATCAACACGAGCTTG-TGACCCGTGCTTACTGGGAATT-C 239 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | |||| ||||||| | ||||||||||||| |||| | || Sbjct 238 CTCGTTCATGGGAAACAGTTGCAATCCCCAATCCCCATCACGAGCGGGGTTCAGCGGGTT 179 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||| |||| | || || ||| ||||||| |||||||||| Sbjct 178 ACCCACGCCTGTCGGCGAAGGGCAGGCACACGCTGATCCGCTCAGTGTGGCGCGCGTGCA 119 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 118 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 66 >seq125516 Length=294 Score = 161 bits (178), Expect = 1e-37 Identities = 178/232 (77%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 ||||||||||||||| || ||||| |||||||| |||| || ||||||| |||||| ||| Sbjct 1 ACAAAGGGCAGGGACTTAATCAACACGAGCTTG-TGACCCGTGCTTACTGGGAATT-CCT 58 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTAC 121 |||| | | |||| ||||||| | ||||||||||||| |||| | |||| Sbjct 59 CGTTCATGGGAAACAGTTGCAATCCCCAATCCCCATCACGAGCGGGGTTCAGCGGGTTAC 118 Query 122 CCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGC 181 || ||||||||| | || | || || ||| ||||||| |||||||||| || Sbjct 119 CCACGCCTGTCGGCGAGGGGCAGGCACACGCTGATCCGCTCAGTGTGGCGCGCGTGCAGC 178 Query 182 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 || | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 179 CCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 229 >seq385084 Length=898 Score = 141 bits (156), Expect = 1e-31 Identities = 163/213 (77%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||| |||||||| |||| || ||||||| |||| ||| Sbjct 689 GTACAAAGGGCAGGGACTTAATCAACACGAGCTTG-TGACCCGTGCTTACTGGGAA-TTC 746 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA--AAGAT 118 |||||| | | |||| ||||||| | ||||||||||||| |||| | | Sbjct 747 CTCGTTCATGGGAAACAGTTGCAATCCCCAATCCCCATCACGAGCGGGGTTCAGCGGGTT 806 Query 119 TACCCGGACCTGTCGGC-CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||||| ||||||||| |||| | || || ||| ||||||| ||||||||| Sbjct 807 TACCCACGCCTGTCGGCGTAAGGGCAGGCACACGCTGATCCGCTCAGTGTGGCGCGCGTG 866 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTG 210 | |||| | |||||||||||||||||||||||| Sbjct 867 CAGCCC-GGACATCTAAGGGCATCACAGACCTG 898 >seq137541 Length=188 Score = 105 bits (116), Expect = 1e-20 Identities = 130/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-T 118 ||||||| | | |||| ||||||| | ||||||||||||| |||| | | Sbjct 188 CCTCGTTCATGGGAAACAGTTGCAATCCCCAATCCCCATCACGAGCGGGGTTCAGCGGGT 129 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| ||||||||| |||| | || || ||| ||||||| |||||||||| Sbjct 128 TACCCACGCCTGTCGGCGAAGGGCAGGCACACGCTGATCCGCTCAGTGTGGCGCGCGTGC 69 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 68 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 15 >seq123873 Length=234 Score = 98.7 bits (108), Expect = 1e-18 Identities = 85/103 (83%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||| |||||||| |||| || ||||||| |||| ||| Sbjct 223 GTACAAAGGGCAGGGACTTAATCAACACGAGCTTG-TGACCCGTGCTTACTGGGAA-TTC 166 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||| | | |||| ||||||| | ||||||||||||| Sbjct 165 CTCGTTCATGGGAAACAGTTGCAATCCCCAATCCCCATCACGA 123 >seq363986 Length=457 Score = 87.8 bits (96), Expect = 3e-15 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 ||||||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 243 TCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 301 Query 221 AAACTTCCGTGGC 233 || || ||||| Sbjct 302 AATCTCGTGTGGC 314 Score = 84.2 bits (92), Expect = 3e-14 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||| |||||||| |||| || ||||||| |||| ||| Sbjct 126 GTACAAAGGGCAGGGACTTAATCAACACGAGCTTG-TGACCCGTGCTTACTGGGAA-TTC 183 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 |||||| | | |||| ||||||| Sbjct 184 CTCGTTCATGGGAAACAGTTGCAAT 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 748886194305