Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26]
427,427 sequences; 824,311,139 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq376017 96.9 2e-18
seq104563 96.9 2e-18
seq155453 93.3 2e-17
seq22069 80.6 1e-13
>seq376017
Length=457
Score = 96.9 bits (106), Expect = 2e-18
Identities = 93/118 (79%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTA-AGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
|||||||||||||||| |||| || || | || ||| |||| ||||| ||||
Sbjct 237 GAACCCAAAGACTTTGGTTTCCCGGGTAGCTCCCCGGCGGGTCATGGGAATAACGCCGCC 296
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 297 GGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 354
>seq104563
Length=161
Score = 96.9 bits (106), Expect = 2e-18
Identities = 93/118 (79%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTA-AGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
|||||||||||||||| |||| || || | || ||| |||| ||||| ||||
Sbjct 16 GAACCCAAAGACTTTGGTTTCCCGGGTAGCTCCCCGGCGGGTCATGGGAATAACGCCGCC 75
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 76 GGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 133
>seq155453
Length=172
Score = 93.3 bits (102), Expect = 2e-17
Identities = 92/118 (78%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTA-AGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
|||||||||||||||| |||| || || | || ||| |||| ||||| ||||
Sbjct 30 GAACCCAAAGACTTTGGTTTCCCGGGTAGCTCCCCGGCGGGTCATGGGAATAACGCCGCC 89
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||| ||||| ||| |||||||||||||| ||||||||||||
Sbjct 90 GGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCCGATCGTCTTCGA 147
>seq22069
Length=157
Score = 80.6 bits (88), Expect = 1e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108
||||| |||| |||| ||||||||||| ||||| ||| ||||||||||||||||||
Sbjct 13 ATAACGCCGCCGGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGAT 72
Query 109 CGTCTTCGA 117
|||||||||
Sbjct 73 CGTCTTCGA 81
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 277284415530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |