Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq376017 96.9 2e-18 seq104563 96.9 2e-18 seq155453 93.3 2e-17 seq22069 80.6 1e-13 >seq376017 Length=457 Score = 96.9 bits (106), Expect = 2e-18 Identities = 93/118 (79%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTA-AGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 |||||||||||||||| |||| || || | || ||| |||| ||||| |||| Sbjct 237 GAACCCAAAGACTTTGGTTTCCCGGGTAGCTCCCCGGCGGGTCATGGGAATAACGCCGCC 296 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 297 GGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 354 >seq104563 Length=161 Score = 96.9 bits (106), Expect = 2e-18 Identities = 93/118 (79%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTA-AGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 |||||||||||||||| |||| || || | || ||| |||| ||||| |||| Sbjct 16 GAACCCAAAGACTTTGGTTTCCCGGGTAGCTCCCCGGCGGGTCATGGGAATAACGCCGCC 75 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 76 GGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 133 >seq155453 Length=172 Score = 93.3 bits (102), Expect = 2e-17 Identities = 92/118 (78%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTA-AGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 |||||||||||||||| |||| || || | || ||| |||| ||||| |||| Sbjct 30 GAACCCAAAGACTTTGGTTTCCCGGGTAGCTCCCCGGCGGGTCATGGGAATAACGCCGCC 89 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| |||||||||||||| |||||||||||| Sbjct 90 GGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCCGATCGTCTTCGA 147 >seq22069 Length=157 Score = 80.6 bits (88), Expect = 1e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 ||||| |||| |||| ||||||||||| ||||| ||| |||||||||||||||||| Sbjct 13 ATAACGCCGCCGGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGAT 72 Query 109 CGTCTTCGA 117 ||||||||| Sbjct 73 CGTCTTCGA 81 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277284415530